BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0720.1
(310 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OAY70583.1 putative ribonuclease H protein [Ananas comosus] 93 2e-19
OAY82899.1 putative ribonuclease H protein [Ananas comosus] 89 1e-17
XP_007227289.1 hypothetical protein PRUPE_ppa017169mg [Prunus pe... 89 5e-17
>OAY70583.1 putative ribonuclease H protein [Ananas comosus]
Length = 181
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 152 KTNIQTWRPPSTPYIKINVDASFVNLNEQARIGYIIRDAEANFIIAVADTVRGQHAEECE 211
K N+ +WRPP ++K+N D SFV+ + G++ RD +F+ A A RG E
Sbjct: 2 KNNLVSWRPPPEGWVKLNADGSFVSRDSNGGAGFVARDCNGHFLFAGASDCRGVDPLYSE 61
Query: 212 SLAILSGLLGAMQLQLSYVHLESDNQAIIRALNGN-GGSLHWESQSIIQQIKDIKDKFTG 270
I S L A + L V LESD+ + + + G + S+ ++QQ +D++D F
Sbjct: 62 LCGIRSALTEAKKAGLPRVILESDSSSAVHLVGGGISKNAPRGSKQLVQQCQDLRDSFPE 121
Query: 271 IIFTHVSRNCNTYADALAKWGRTHGHRKMW 300
II H R N+ AD LA GR G + +
Sbjct: 122 IIIQHTYRESNSVADRLAAVGRQSGRTQFF 151
>OAY82899.1 putative ribonuclease H protein [Ananas comosus]
Length = 181
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Query: 152 KTNIQTWRPPSTPYIKINVDASFVNLNEQARIGYIIRDAEANFIIAVADTVRGQHAEECE 211
K N+ +W PP ++K+N D SFV+ + G++ RD +F+ A A RG E
Sbjct: 2 KNNLVSWCPPPEGWVKLNADGSFVSRDSNGGAGFVARDCNGHFLFAGASDCRGVDPLYSE 61
Query: 212 SLAILSGLLGAMQLQLSYVHLESDNQAIIRALNGN-GGSLHWESQSIIQQIKDIKDKFTG 270
I S L A + L V LESD+ + + + G + S+ ++QQ +D++D F
Sbjct: 62 LCGIRSALTEAKKAGLPRVILESDSSSAVHLVGGGISKNAPRGSKQLVQQCQDLRDSFPE 121
Query: 271 IIFTHVSRNCNTYADALAKWGRTHGHRKMW 300
II H R N+ AD LA GR G + +
Sbjct: 122 IIIQHTYREGNSVADRLAVVGRQSGRTQFF 151
>XP_007227289.1 hypothetical protein PRUPE_ppa017169mg [Prunus persica] EMJ28488.1
hypothetical protein PRUPE_ppa017169mg [Prunus persica]
Length = 294
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 125/289 (43%), Gaps = 30/289 (10%)
Query: 29 LGNLYLNTTIRVSLIFWNINKGEQINIWTDYWIPNHP-----PPITNDRGCTLDKVSQLI 83
+G + L W + G I +W D W+P P PP T L +V +I
Sbjct: 1 MGKVVLGQGYPARGAHWQVMNGAHIRLWVDRWLPTSPNAYPRPPSTETFDQNL-RVEAII 59
Query: 84 TN--GKWNLNVINMCFNNDICSAILSINLNPSE-EDKAIWTLTK--SEMIKR----INNT 134
+WN I + + AI I L S D+ IW + + S ++ ++N
Sbjct: 60 NRELNEWNFYPIRQAISASVARAITKIKLGSSRLPDQLIWAMKRNGSYFVRSGYHWLHNI 119
Query: 135 TTTP--LRTESSITIKC-------------KEKTNIQTWRPPSTPYIKINVDASFVNLNE 179
LR SS+ I K +T++ + PP++P++KINVD S+ +
Sbjct: 120 ELRRRNLRPSSSMAIDPRLWKEVWKRMSHQKFETSLTSLEPPASPFVKINVDVSWNPNSR 179
Query: 180 QARIGYIIRDAEANFIIAVADTVRGQHAEECESLAILSGLLGAMQLQLSYVHLESDNQAI 239
+ IG +IRD +F+ ++ A + E LA L G +++ V ESD + I
Sbjct: 180 RVGIGILIRDTHEDFLKGISILYVANSAIKAEVLACLQGCKLTIEIVYRQVTFESDCKEI 239
Query: 240 IRALNGNGGSLHWESQSIIQQIKDIKDKFTGIIFTHVSRNCNTYADALA 288
I +L + WE I+ ++D+ + F ++T + R N AD LA
Sbjct: 240 ISSLKSSISKGSWEIYPILSNVRDVLNYFQTCVWTWIPRTANQVADHLA 288