BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0850.1
(636 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP69041.1 Retrovirus-related Pol polyprotein from transposon TN... 674 0.0
KYP44533.1 Retrovirus-related Pol polyprotein from transposon TN... 674 0.0
KYP66220.1 Retrovirus-related Pol polyprotein from transposon TN... 665 0.0
>KYP69041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1342
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/633 (54%), Positives = 454/633 (71%), Gaps = 28/633 (4%)
Query: 1 MSNMIQP-QIPRLTKENYEHWCIQMSVLLGSQDLWDIVQNGYVEPTQEEESFMNDVRKCV 59
M+N P Q+P LTK NY++W ++M LLG+ D+W++V+ G+ EP E ++ +K
Sbjct: 1 MANTGVPFQVPMLTKSNYDNWSLRMVALLGAHDVWEVVEKGHTEPENVES--LSQAQKDS 58
Query: 60 LKDSRKMDKKALFLIYQGIDGPTFEKVSEAKSSKEAWNILKNSFRGVDKVVKVRLQILRG 119
L+DSRK DKKAL LIYQG+D TFEK+S K++KEAW LK S++G D+V KVRLQ LRG
Sbjct: 59 LRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRG 118
Query: 120 EFERLSMNEGELVSDYVSRVLSNVNEMKRCGEKCDDVRVMEKILRSLTPKFDNVVIVVEE 179
EFE L M EGELVSDY SRVL+ N +KR GEK DDVR+MEKILRSL PKF+++V + EE
Sbjct: 119 EFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEE 178
Query: 180 SKDLEAMTVDELMGTLQIHEQRVNRSVATSSNCSVDQVLQAKL-TLEEKQYTPQKERGY- 237
+KDLEAM++++L+G+LQ +E++ + V+QV +A + + +E+ Q R Y
Sbjct: 179 TKDLEAMSIEQLLGSLQAYEEKKKKKEEI-----VEQVFKAHVDSRKEENAHNQSRRSYS 233
Query: 238 ESYGRGYDNGRRGFGSQRGR---NFFTRGRTNEPRGRGRGNFTRPYNSQGRDKRDIECYN 294
+ GRG R +G +GR N RG ++ RGRGRGN Y DK I+CYN
Sbjct: 234 QEQGRG-----RAYGHGQGRRPNNNNQRGESSN-RGRGRGNPNSRY-----DKSRIKCYN 282
Query: 295 CHKLGHYSNECWY--KNEVKEESNLVEDEVEINVDPTLLFSCDGLDELQTNTWYFDTGAS 352
C+K GHY++EC KN+V+E++N E+ + D TLL + G D+ + N WY D+GAS
Sbjct: 283 CNKFGHYASECRAPNKNKVEEKANYAEERCQ--EDGTLLLAYKGQDKGEDNQWYLDSGAS 340
Query: 353 NHICGKRELFVEVNESVKGCVKFGDSSKIPVLGKGNILIQLKNGKHNYIFDVYYVPAMKN 412
NH+CGKR +FVE++ESVKG V FGD SK+ V GKGN+LI+LKNG+H +I +VYYVP+MK+
Sbjct: 341 NHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKS 400
Query: 413 NILSLGQLLEKGYDIRLKDLHITLRDKSGTLIAMVKMAKNRLFPLNIQHGDAKCLNSIVK 472
NILSLGQLLEKGYDI+LK+ ++++RD + IA V M +NR+F LNIQ +CL K
Sbjct: 401 NILSLGQLLEKGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYK 460
Query: 473 DESWLWHLRLGHLNFDGMKTLASKNMVRGLPCIDHPNKVCEGCIFGKHHRTSFSKEGRWR 532
D+SWLWHLR GHLNF G++ L+ K MVRGLPCI HPN+VCEGC+ GK R SF KE R
Sbjct: 461 DQSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSR 520
Query: 533 ASNILELVHTDGCGPLKPMTNGGNNYFLTFIDDFSRKTWVYFLKNKSEVFEAFKEFKNMV 592
A LEL+HTD CGP+KP + G +NYFL FIDDFSRKTWVYFLK KSEVFE FK+FK V
Sbjct: 521 AQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHV 580
Query: 593 EKQSGFMIKKLRSDRGGEYTSRAFDMFLENMGL 625
EK+SG +IK LRSDRGGE+TS+ F + E+ G+
Sbjct: 581 EKESGLLIKALRSDRGGEFTSKEFQKYCEDNGI 613
>KYP44533.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1342
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/633 (54%), Positives = 454/633 (71%), Gaps = 28/633 (4%)
Query: 1 MSNMIQP-QIPRLTKENYEHWCIQMSVLLGSQDLWDIVQNGYVEPTQEEESFMNDVRKCV 59
M+N P Q+P LTK NY++W ++M LLG+ D+W++V+ G+ EP E ++ +K
Sbjct: 1 MANTGVPFQVPMLTKSNYDNWSLRMVALLGAHDVWEVVEKGHTEPENVES--LSQAQKDS 58
Query: 60 LKDSRKMDKKALFLIYQGIDGPTFEKVSEAKSSKEAWNILKNSFRGVDKVVKVRLQILRG 119
L+DSRK DKKAL LIYQG+D TFEK+S K++KEAW LK S++G D+V KVRLQ LRG
Sbjct: 59 LRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRG 118
Query: 120 EFERLSMNEGELVSDYVSRVLSNVNEMKRCGEKCDDVRVMEKILRSLTPKFDNVVIVVEE 179
EFE L M EGELVSDY SRVL+ N +KR GEK DDVR+MEKILRSL PKF+++V + EE
Sbjct: 119 EFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEE 178
Query: 180 SKDLEAMTVDELMGTLQIHEQRVNRSVATSSNCSVDQVLQAKL-TLEEKQYTPQKERGY- 237
+KDLEAM++++L+G+LQ +E++ + V+QV +A + + +E+ Q R Y
Sbjct: 179 TKDLEAMSIEQLLGSLQAYEEKKKKKEEI-----VEQVFKAHVDSRKEENAHNQSRRSYS 233
Query: 238 ESYGRGYDNGRRGFGSQRGR---NFFTRGRTNEPRGRGRGNFTRPYNSQGRDKRDIECYN 294
+ GRG R +G +GR N RG ++ RGRGRGN Y DK I+CYN
Sbjct: 234 QEQGRG-----RAYGHGQGRRPNNNNQRGESSN-RGRGRGNPNSRY-----DKSRIKCYN 282
Query: 295 CHKLGHYSNECWY--KNEVKEESNLVEDEVEINVDPTLLFSCDGLDELQTNTWYFDTGAS 352
C+K GHY++EC KN+V+E++N E+ + D TLL + G D+ + N WY D+GAS
Sbjct: 283 CNKFGHYASECRAPNKNKVEEKANYAEERCQ--EDGTLLLAYKGQDKGEDNQWYLDSGAS 340
Query: 353 NHICGKRELFVEVNESVKGCVKFGDSSKIPVLGKGNILIQLKNGKHNYIFDVYYVPAMKN 412
NH+CGKR +FVE++ESVKG V FGD SK+ V GKGN+LI+LKNG+H +I +VYYVP+MK+
Sbjct: 341 NHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKS 400
Query: 413 NILSLGQLLEKGYDIRLKDLHITLRDKSGTLIAMVKMAKNRLFPLNIQHGDAKCLNSIVK 472
NILSLGQLLEKGYDI+LK+ ++++RD + IA V M +NR+F LNIQ +CL K
Sbjct: 401 NILSLGQLLEKGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYK 460
Query: 473 DESWLWHLRLGHLNFDGMKTLASKNMVRGLPCIDHPNKVCEGCIFGKHHRTSFSKEGRWR 532
D+SWLWHLR GHLNF G++ L+ K MVRGLPCI HPN+VCEGC+ GK R SF KE R
Sbjct: 461 DQSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSR 520
Query: 533 ASNILELVHTDGCGPLKPMTNGGNNYFLTFIDDFSRKTWVYFLKNKSEVFEAFKEFKNMV 592
A LEL+HTD CGP+KP + G +NYFL FIDDFSRKTWVYFLK KSEVFE FK+FK V
Sbjct: 521 AQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHV 580
Query: 593 EKQSGFMIKKLRSDRGGEYTSRAFDMFLENMGL 625
EK+SG +IK LRSDRGGE+TS+ F + E+ G+
Sbjct: 581 EKESGLLIKALRSDRGGEFTSKEFQKYCEDNGI 613
>KYP66220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1331
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/621 (55%), Positives = 445/621 (71%), Gaps = 27/621 (4%)
Query: 12 LTKENYEHWCIQMSVLLGSQDLWDIVQNGYVEPTQEEESFMNDVRKCVLKDSRKMDKKAL 71
LTK NY++W ++M LLG+ D+W++V+ G+ EP E ++ +K L+DSRK DKKAL
Sbjct: 2 LTKSNYDNWSLRMVALLGAHDVWEVVEKGHTEPENVES--LSQAQKDSLRDSRKRDKKAL 59
Query: 72 FLIYQGIDGPTFEKVSEAKSSKEAWNILKNSFRGVDKVVKVRLQILRGEFERLSMNEGEL 131
LIYQG+D TFEK+S K++KEAW LK S++G D+V KVRLQ LRGEFE L M EGEL
Sbjct: 60 CLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRGEFEALHMKEGEL 119
Query: 132 VSDYVSRVLSNVNEMKRCGEKCDDVRVMEKILRSLTPKFDNVVIVVEESKDLEAMTVDEL 191
VSDY SRVL+ N +KR GEK DDVR+MEKILRSL PKF+++V + EE+KDLEAM++++L
Sbjct: 120 VSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAMSIEQL 179
Query: 192 MGTLQIHEQRVNRSVATSSNCSVDQVLQAKL-TLEEKQYTPQKERGY-ESYGRGYDNGRR 249
+G+LQ +E++ + V+QV +A + + +E+ Q R Y + GRG R
Sbjct: 180 LGSLQAYEEKKKKKEEI-----VEQVFKAHVDSRKEENAHNQSRRSYSQEQGRG-----R 229
Query: 250 GFGSQRGR---NFFTRGRTNEPRGRGRGNFTRPYNSQGRDKRDIECYNCHKLGHYSNECW 306
+G +GR N RG ++ RGRGRGN Y DK I+CYNC+K GHY++EC
Sbjct: 230 AYGHGQGRRPNNNNQRGESSN-RGRGRGNPNSRY-----DKSRIKCYNCNKFGHYASECR 283
Query: 307 Y--KNEVKEESNLVEDEVEINVDPTLLFSCDGLDELQTNTWYFDTGASNHICGKRELFVE 364
KN+V+E++N E+ + D TLL + G D+ + N WY D+GASNH+CGKR +FVE
Sbjct: 284 APNKNKVEEKANYAEERCQ--EDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVE 341
Query: 365 VNESVKGCVKFGDSSKIPVLGKGNILIQLKNGKHNYIFDVYYVPAMKNNILSLGQLLEKG 424
++ESVKG V FGD SK+ V GKGN+LIQLKNG+H +I ++YYVP+MK+NILSLGQLLEKG
Sbjct: 342 LDESVKGNVAFGDESKVAVEGKGNVLIQLKNGEHQFISNIYYVPSMKSNILSLGQLLEKG 401
Query: 425 YDIRLKDLHITLRDKSGTLIAMVKMAKNRLFPLNIQHGDAKCLNSIVKDESWLWHLRLGH 484
YDI+LK+ ++++RD + I V M +NR+F LNIQ +CL KD+SWLWHLR GH
Sbjct: 402 YDIQLKNNNLSIRDNTSRFITKVPMMRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGH 461
Query: 485 LNFDGMKTLASKNMVRGLPCIDHPNKVCEGCIFGKHHRTSFSKEGRWRASNILELVHTDG 544
LNF G+ L+ K MVRGLPCI HPN+VCEGC+ GK R SF KE RA LEL+HTD
Sbjct: 462 LNFKGLDLLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDV 521
Query: 545 CGPLKPMTNGGNNYFLTFIDDFSRKTWVYFLKNKSEVFEAFKEFKNMVEKQSGFMIKKLR 604
CGP+KP + G +NYFL FIDDFSRKTWVYFLK KSEVFE FK+FK VEK+SG +IK LR
Sbjct: 522 CGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALR 581
Query: 605 SDRGGEYTSRAFDMFLENMGL 625
SDRGGE+TS+ F + E+ G+
Sbjct: 582 SDRGGEFTSKEFQKYCEDNGI 602