BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g1000.1
(176 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP74792.1 Copia protein [Cajanus cajan] 270 1e-90
KYP62017.1 Retrovirus-related Pol polyprotein from transposon TN... 270 9e-90
CAN71425.1 hypothetical protein VITISV_002520 [Vitis vinifera] 271 9e-87
>KYP74792.1 Copia protein [Cajanus cajan]
Length = 179
Score = 270 bits (691), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 151/175 (86%)
Query: 1 MRYLQGTKDYKLTYGYTDHLELVGYSDSDFAGCVDSRKSTSGYIFLLARGAISWRSTKQT 60
MRYLQGTKD+ LTY TD LE++GYSDSDFAGC+D+RKSTSGY+F+LA GA+SW S KQT
Sbjct: 1 MRYLQGTKDFMLTYRRTDSLEVIGYSDSDFAGCIDTRKSTSGYVFMLACGAVSWSSRKQT 60
Query: 61 ILATSTMEAEFIACYEATTQAIWLRNFVSGLKIIDTIERPLKILCDNSAAVFFSKNNKSG 120
+ ATSTMEAEF++C+EAT+ +WL++F+SGL+++D+I +PLK+ CDNSAAVF +KNNKSG
Sbjct: 61 LTATSTMEAEFVSCFEATSHGVWLKSFISGLRVVDSIAKPLKLYCDNSAAVFMAKNNKSG 120
Query: 121 SRSKHIDIKYLLVRDKVKEHVLAIEHISTKLMIADSMTKALPAQVFLDHVERMGF 175
SRSKHIDIKYL +R++VKE + IEH+ST+LMIAD +TK +P + F DHV RMG
Sbjct: 121 SRSKHIDIKYLAIRERVKEKKVVIEHVSTELMIADPLTKGMPPKNFKDHVTRMGL 175
>KYP62017.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 215
Score = 270 bits (689), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 151/175 (86%)
Query: 1 MRYLQGTKDYKLTYGYTDHLELVGYSDSDFAGCVDSRKSTSGYIFLLARGAISWRSTKQT 60
MRYLQGTKD+ LTY TD LE++GYSDSDFAGC+D+RKSTSGY+F+LA GA+SW S KQT
Sbjct: 37 MRYLQGTKDFMLTYRRTDSLEVIGYSDSDFAGCIDTRKSTSGYVFMLACGAVSWSSRKQT 96
Query: 61 ILATSTMEAEFIACYEATTQAIWLRNFVSGLKIIDTIERPLKILCDNSAAVFFSKNNKSG 120
+ ATSTMEAEF++C+EAT+ +WL++F+SGL+++D+I +PLK+ CDNSAA+F +KNNKSG
Sbjct: 97 LTATSTMEAEFVSCFEATSHGVWLKSFISGLRVVDSIAKPLKLYCDNSAAIFMAKNNKSG 156
Query: 121 SRSKHIDIKYLLVRDKVKEHVLAIEHISTKLMIADSMTKALPAQVFLDHVERMGF 175
SRSKHIDIKYL +R++VKE + IEH+ST+LMIAD +TK +P + F DHV RMG
Sbjct: 157 SRSKHIDIKYLAIRERVKEKKVVIEHVSTELMIADPLTKGMPPKNFKDHVTRMGL 211
>CAN71425.1 hypothetical protein VITISV_002520 [Vitis vinifera]
Length = 480
Score = 271 bits (692), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 147/175 (84%)
Query: 1 MRYLQGTKDYKLTYGYTDHLELVGYSDSDFAGCVDSRKSTSGYIFLLARGAISWRSTKQT 60
MRYLQGTKDYKL Y T +LE+VGYSDSDFAGCVDS KSTSGYIF+LA GAISWRS KQT
Sbjct: 302 MRYLQGTKDYKLMYRRTSNLEVVGYSDSDFAGCVDSHKSTSGYIFILAGGAISWRSVKQT 361
Query: 61 ILATSTMEAEFIACYEATTQAIWLRNFVSGLKIIDTIERPLKILCDNSAAVFFSKNNKSG 120
+ ATSTMEAEFI+C+EAT+ +WL++F+SGL+++D+I RPL I CDNSAAVF +KNNKSG
Sbjct: 362 MTATSTMEAEFISCFEATSHGVWLKSFISGLRVMDSISRPLSIYCDNSAAVFMAKNNKSG 421
Query: 121 SRSKHIDIKYLLVRDKVKEHVLAIEHISTKLMIADSMTKALPAQVFLDHVERMGF 175
SRSKHIDIKYL +R +VKE + IEHIST+LMIAD +TK +P F DHV MG
Sbjct: 422 SRSKHIDIKYLAIRKRVKEKKVVIEHISTELMIADPLTKGMPPLKFKDHVVNMGL 476