BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g1010.1
(354 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP35822.1 Retrovirus-related Pol polyprotein from transposon TN... 368 e-123
CAN79309.1 hypothetical protein VITISV_020559 [Vitis vinifera] 372 e-113
BAG72096.1 Gag-protease-integrase-RT-RNaseH polyprotein [Glycine... 358 e-110
>KYP35822.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 406
Score = 368 bits (945), Expect = e-123, Method: Compositional matrix adjust.
Identities = 187/348 (53%), Positives = 234/348 (67%), Gaps = 5/348 (1%)
Query: 7 IPILCGDNFSDWKDSVLFTLGCMDLDLALRVDAPPIPTESSTPQERLDYERWERSNRLSL 66
IP L GDN+ WK+ VL LG MD+D A+R APP TE+STP YE+WERSNRLS+
Sbjct: 10 IPELKGDNYKVWKERVLLHLGWMDIDYAIRKPAPPGITETSTPDAVDLYEKWERSNRLSV 69
Query: 67 MLIKSRVNKSIRGSIPDCPHAKDFLKTVEEQFVRSDKAQASTLMKRLSDKTFDYSKGVRE 126
IK+ ++ IRGS+ + KD LK ++EQF SDK+ ASTL+ + S KGVR+
Sbjct: 70 TFIKTNISAGIRGSVDHHDNVKDLLKAIDEQFTTSDKSLASTLIMQFSSLKLTGIKGVRD 129
Query: 127 HIMGMRDIAAQLKPLKVEIHESFLVHLVLNSLPKEYGPFKISYNIHKENWSINELLTMCV 186
HIM +RDI AQLK L+V + +SFLVH +L +LP Y PFKISYN HK+ WSINELLTMCV
Sbjct: 130 HIMRIRDIVAQLKALEVTMSDSFLVHYILCTLPHHYAPFKISYNTHKDKWSINELLTMCV 189
Query: 187 QEEERMKHEKLESAHFVSHDKGSTKKRKHVQNVQNKETMPLKNHGKLVKCFFCRKAGLEK 246
QEEER+ E+ E K + + + + K KCFFC+K G K
Sbjct: 190 QEEERLMMEEGEQVLLTGSFKKKKNQDNKKGKIPAQPIIK-----KESKCFFCKKKGHMK 244
Query: 247 KDCLKYKNWLEKKGNLISCVCHESFFVDAPTNTWWIDSGSTIHIVNTMQGFLDLRKPKGN 306
KDCLK+KNWLEKKGNL + VC+ES NTWWIDSGSTIH+ NT+QG +LRKP G+
Sbjct: 245 KDCLKFKNWLEKKGNLFAFVCYESNMTSTNHNTWWIDSGSTIHVSNTLQGMQNLRKPMGS 304
Query: 307 EVGIYSGNRMRSQVEAVGIFRLILKTGFVLDLNNVFYVPSFSRNLISV 354
E IYSG++M S VEAVG L+L +GF+L+L FYVPSFS+NLIS+
Sbjct: 305 EQCIYSGSKMSSHVEAVGTCNLVLSSGFILNLEKTFYVPSFSKNLISI 352
>CAN79309.1 hypothetical protein VITISV_020559 [Vitis vinifera]
Length = 1851
Score = 372 bits (955), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/348 (54%), Positives = 237/348 (68%), Gaps = 5/348 (1%)
Query: 7 IPILCGDNFSDWKDSVLFTLGCMDLDLALRVDAPPIPTESSTPQERLDYERWERSNRLSL 66
IP L DN+ W + +L LGCMD+D A+R D P I ++ST E+ YE+WERSNRLSL
Sbjct: 13 IPKLKSDNYKVWNERILLHLGCMDIDYAIRKDKPTI-IDTSTTAEKALYEQWERSNRLSL 71
Query: 67 MLIKSRVNKSIRGSIPDCPHAKDFLKTVEEQFVRSDKAQASTLMKRLSDKTFDYSKGVRE 126
M IK++++ IRGS+ + K LK ++EQFV SDKA ASTL+ + S GVRE
Sbjct: 72 MFIKTKISYGIRGSVDQHDNVKALLKAIDEQFVTSDKALASTLIMKFSSLRLTNVNGVRE 131
Query: 127 HIMGMRDIAAQLKPLKVEIHESFLVHLVLNSLPKEYGPFKISYNIHKENWSINELLTMCV 186
HIM MRDIAAQLK L+VEI +SFLVH +LN+LP++YGPFKISYN H++ WSINELLTMCV
Sbjct: 132 HIMQMRDIAAQLKTLEVEISDSFLVHFILNTLPQQYGPFKISYNTHRDKWSINELLTMCV 191
Query: 187 QEEERMKHEKLESAHFVSHDKGSTKKRKHVQNVQNKETMPLKNHGKLVKCFFCRKAGLEK 246
QEE R+K E E+A K + + + P K+ KCFF +K G K
Sbjct: 192 QEEGRLKMELGENALMTMEG----KDQNQAKKKGKGKIPPQGGIKKVNKCFFYKKKGHMK 247
Query: 247 KDCLKYKNWLEKKGNLISCVCHESFFVDAPTNTWWIDSGSTIHIVNTMQGFLDLRKPKGN 306
K C K++ WLEKKG IS C+ES VD NTWWI SGSTIH+ NT+QG +LRKP +
Sbjct: 248 KGCTKFQKWLEKKGKPISFFCYESNMVDVIYNTWWIYSGSTIHVSNTLQGMQNLRKPMPS 307
Query: 307 EVGIYSGNRMRSQVEAVGIFRLILKTGFVLDLNNVFYVPSFSRNLISV 354
E IYSGN+MRS VEAVG L+L +GF+L+L FYVPSFSRNLISV
Sbjct: 308 EQCIYSGNKMRSHVEAVGTCNLVLSSGFILNLEKTFYVPSFSRNLISV 355
>BAG72096.1 Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 358 bits (920), Expect = e-110, Method: Compositional matrix adjust.
Identities = 175/326 (53%), Positives = 223/326 (68%)
Query: 29 MDLDLALRVDAPPIPTESSTPQERLDYERWERSNRLSLMLIKSRVNKSIRGSIPDCPHAK 88
MD+D A+R D PP T S+P + YERWERSNRLS+M IK++++ IRGS+ +
Sbjct: 1 MDIDYAIRKDEPPAITNESSPADVALYERWERSNRLSVMFIKTKISAGIRGSVDQHEKVR 60
Query: 89 DFLKTVEEQFVRSDKAQASTLMKRLSDKTFDYSKGVREHIMGMRDIAAQLKPLKVEIHES 148
D LK +++QF+ SDK ASTL+ + S KGVRE+IM MRDI+AQLK L+V++ ES
Sbjct: 61 DLLKAIDDQFITSDKTLASTLIMKFSSLRLTSVKGVREYIMKMRDISAQLKKLEVDMSES 120
Query: 149 FLVHLVLNSLPKEYGPFKISYNIHKENWSINELLTMCVQEEERMKHEKLESAHFVSHDKG 208
FLVH +LN+LP EYGPFKISYN HK+ WSINEL+TMCVQEEER+ E ESA +
Sbjct: 121 FLVHFILNTLPHEYGPFKISYNTHKDKWSINELMTMCVQEEERLVMEMGESALLTTAYGK 180
Query: 209 STKKRKHVQNVQNKETMPLKNHGKLVKCFFCRKAGLEKKDCLKYKNWLEKKGNLISCVCH 268
+ + N + P + K+ KCFFC+K G KK+C ++ WLEKKG IS VC+
Sbjct: 181 NKAIKSQAYQKGNGKIPPQADIKKVAKCFFCKKKGHMKKNCPGFQKWLEKKGKSISLVCY 240
Query: 269 ESFFVDAPTNTWWIDSGSTIHIVNTMQGFLDLRKPKGNEVGIYSGNRMRSQVEAVGIFRL 328
ES V NTWWIDSGSTIHI N++QG +LRKP G+E I SGN++ S VEA+G L
Sbjct: 241 ESNMVSVNINTWWIDSGSTIHIANSLQGMQNLRKPVGSEQSILSGNKLGSHVEAIGTCIL 300
Query: 329 ILKTGFVLDLNNVFYVPSFSRNLISV 354
L +GF+L L FYVPSFSRNLIS+
Sbjct: 301 TLSSGFILKLERTFYVPSFSRNLISI 326