BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g1020.1
(484 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BAG72096.1 Gag-protease-integrase-RT-RNaseH polyprotein [Glycine... 631 0.0
KYP65984.1 Retrovirus-related Pol polyprotein from transposon TN... 573 0.0
KYP36562.1 Retrovirus-related Pol polyprotein from transposon TN... 571 0.0
>BAG72096.1 Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 631 bits (1627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/502 (62%), Positives = 379/502 (75%), Gaps = 23/502 (4%)
Query: 1 MHADVGIKRNRIDENSSTLWQRRLGHISIERVKRLVKDGVLKTLDFTDFGTCVDCIKGKE 60
MH GIKR I+ENSS LW RRLGHISIER+KRLVKDGVL TLDF DF TC+DCIKGK+
Sbjct: 375 MHVQTGIKRCNINENSSMLWHRRLGHISIERIKRLVKDGVLNTLDFADFKTCMDCIKGKQ 434
Query: 61 TNKTSKGAKRSSQILEIIHTDICGPFPTPCLNGQRYFISFIDDHTRFMYLYLLFDKAETF 120
TN + KGA RSS ILEIIHTDIC P +GQ+YFI+FIDD++R+M +YLL +K E
Sbjct: 435 TNMSKKGANRSSSILEIIHTDICCPDMDA--HGQKYFITFIDDYSRYMNVYLLHNKYEAL 492
Query: 121 DAFKSFKAEVEKQKDMKIKIVRSDIGGEYYGRYTEKGQMPSPFAKFLEEEGIVAQYTMPG 180
DAFK FKAEVE Q +IKIVRSD GGEYYGRYTE GQ P PFAKFL+E GIVAQYTMPG
Sbjct: 493 DAFKVFKAEVENQCGKQIKIVRSDRGGEYYGRYTENGQAPGPFAKFLQEHGIVAQYTMPG 552
Query: 181 TPQQNGVAERRNQTLMDMVRSMISNINLPLSLWSEALKTAVYILNRVPSKAVPKTPFELW 240
+P QNGVAERRN+TL+DMVRSM+SN NLP SLW+EALKTA YILNRVP+KAVPKTPFEL+
Sbjct: 553 SPNQNGVAERRNRTLLDMVRSMLSNSNLPKSLWAEALKTAAYILNRVPTKAVPKTPFELF 612
Query: 241 NGWKTSLSHLHIWGCPTEVRIYNPHIKKLDSRTTNGYFIGYAVNSKGFRFYCPSHSQRIV 300
GWK SL H+ +WGCP+EVRIYNP KKLD RT +GYFIGYA SKG+RFYCP H RIV
Sbjct: 613 KGWKPSLKHMRVWGCPSEVRIYNPQEKKLDPRTISGYFIGYAERSKGYRFYCPHHITRIV 672
Query: 301 EARNAKFFEDFDSSG----RDFPCRIEFEETR-----------EEPELPVDTRDLVI-VQ 344
E+RNAKF E+ SG RD I++ E++ P++ D +I +
Sbjct: 673 ESRNAKFIENDLISGSDQLRDLGSEIDYIESQPSTSNERLVVIHTPQVQRDDEQHMIGIP 732
Query: 345 RSQPDIIAQQPTLEQPVHE--EQIPQEPVPQIEHEDVVLRRSSRTRKPDISSDYLVYLQE 402
++ D + Q ++ +HE EQ ++ PQ E+ D LRRS+R RK I SDY+VYLQE
Sbjct: 733 QTVVDNLVDQ--VDHQIHENDEQPVEQHDPQ-ENVDATLRRSTRVRKSAIPSDYIVYLQE 789
Query: 403 SDFDIGPQRDPNSFSEAINGEKSALWYDAMMEEMESMAKNQVWDLVKLPKGSKAIGCKWV 462
SD++IG + DP +F +A++ ++S LWYDAM +EM SM N+VW+LV+LP G+KAIGCKWV
Sbjct: 790 SDYNIGAENDPETFDQAMSCKESNLWYDAMKDEMSSMQSNKVWNLVELPNGAKAIGCKWV 849
Query: 463 YKTKRDSSRNVERYKARLVAKG 484
+KTK+DS N+ERYKARLVAKG
Sbjct: 850 FKTKKDSLGNIERYKARLVAKG 871
>KYP65984.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 789
Score = 573 bits (1477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 276/485 (56%), Positives = 362/485 (74%), Gaps = 2/485 (0%)
Query: 1 MHADVGIKRNRIDENSSTLWQRRLGHISIERVKRLVKDGVLKTLDFTDFGTCVDCIKGKE 60
+H ++G KR +E + LW +RLGH+S ER++RLVK+ +L LDFTD CVDCIKGK+
Sbjct: 112 LHHNIGTKRGLENERFAYLWHKRLGHVSKERLQRLVKNEILPDLDFTDLNVCVDCIKGKQ 171
Query: 61 TNKTSKGAKRSSQILEIIHTDICGPFPTPCLNGQRYFISFIDDHTRFMYLYLLFDKAETF 120
T T KGA RS+Q+LEIIHTDICGPF N ++YFI+FIDD++R+ Y+YLL DK++
Sbjct: 172 TKHTKKGATRSTQLLEIIHTDICGPFDVNSFNKEKYFITFIDDYSRYGYVYLLHDKSQAI 231
Query: 121 DAFKSFKAEVEKQKDMKIKIVRSDIGGEYYGRYTEKGQMPSPFAKFLEEEGIVAQYTMPG 180
+A + + EVE+Q D K+KI+RSD GGEYYGRY E+GQ P PFAKFLE+ GI AQYTMPG
Sbjct: 232 NALEIYIEEVERQLDSKVKIIRSDRGGEYYGRYDERGQHPGPFAKFLEKRGICAQYTMPG 291
Query: 181 TPQQNGVAERRNQTLMDMVRSMISNINLPLSLWSEALKTAVYILNRVPSKAVPKTPFELW 240
TPQQNGV+ER N+TL+DMVRSM+SN +L +SLW+ ALK+A+Y+LNRVPSKAVPKTPFELW
Sbjct: 292 TPQQNGVSERHNRTLLDMVRSMLSNSSLLISLWTYALKSAMYLLNRVPSKAVPKTPFELW 351
Query: 241 NGWKTSLSHLHIWGCPTEVRIYNPHIKKLDSRTTNGYFIGYAVNSKGFRFYCPSHSQRIV 300
G K SL HLH+WGCP ++R YNP KKLD+RT NGYFIGY SKG+RFYCP+H+ RI+
Sbjct: 352 TGRKPSLRHLHVWGCPAKIRFYNPQEKKLDARTINGYFIGYPEKSKGYRFYCPNHTTRII 411
Query: 301 EARNAKFFEDFDSSGRDFPCRIEFEETREEPELPVDTRDLVIVQRSQPDIIAQQPTLEQP 360
E NA+F E+ + SG + P ++E +E R + L + +V+ Q +P ++ P
Sbjct: 412 ETGNARFIENGEVSGSETPRKVEIQEMRVQVPLTCISNKVVVPQVIEPINNHEEQQTNDP 471
Query: 361 V-HEEQIPQEPVPQIEHEDVVLRRSSRTRKPDISSDYLVYLQESDFDIGPQRDPNSFSEA 419
+ H E EP+ + E + + LRRS R R+ I +DY+VYLQES+ D+G + DP +FS+A
Sbjct: 472 ITHNEVEVNEPIVE-EPQQIALRRSQRERRSAIPNDYVVYLQESENDLGIENDPVTFSQA 530
Query: 420 INGEKSALWYDAMMEEMESMAKNQVWDLVKLPKGSKAIGCKWVYKTKRDSSRNVERYKAR 479
ING+ + W DAM E++SM N+VWD V+LP+G K +GCKWV+KTKRDS N+E YKAR
Sbjct: 531 INGDNAEKWLDAMKAELKSMEHNRVWDFVELPEGCKRVGCKWVFKTKRDSHGNLECYKAR 590
Query: 480 LVAKG 484
LVAKG
Sbjct: 591 LVAKG 595
>KYP36562.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 936
Score = 571 bits (1471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 271/487 (55%), Positives = 354/487 (72%), Gaps = 9/487 (1%)
Query: 1 MHADVGIKRNRIDENSSTLWQRRLGHISIERVKRLVKDGVLKTLDFTDFGTCVDCIKGKE 60
+H ++G KR+ ++E S+ LW RRLGHIS ER++RL+K+ +L LDFTD CVDCIKGK+
Sbjct: 348 LHHNIGTKRSLVNERSAFLWHRRLGHISRERMERLIKNEILPNLDFTDLNICVDCIKGKQ 407
Query: 61 TNKTSKGAKRSSQILEIIHTDICGPFPTPCLNGQRYFISFIDDHTRFMYLYLLFDKAETF 120
T T KGA RS+Q+LEI+HTDICGPF ++YFI+FIDD++R+ Y+YLL +K++
Sbjct: 408 TKHTKKGATRSTQLLEIVHTDICGPFDVNSFGKEKYFITFIDDYSRYGYVYLLHEKSQAV 467
Query: 121 DAFKSFKAEVEKQKDMKIKIVRSDIGGEYYGRYTEKGQMPSPFAKFLEEEGIVAQYTMPG 180
DA + + EVE+Q D K+K+VRSD GGEYYGRY E GQ P PFAK L++ GI AQYTMPG
Sbjct: 468 DALEIYLNEVERQLDKKVKVVRSDRGGEYYGRYNETGQHPGPFAKLLQKRGICAQYTMPG 527
Query: 181 TPQQNGVAERRNQTLMDMVRSMISNINLPLSLWSEALKTAVYILNRVPSKAVPKTPFELW 240
TPQQNGV+ERRN+TLMDMVRSM+SN LP+ LW ALKTA+Y+LNRVPSKAV KTPFELW
Sbjct: 528 TPQQNGVSERRNRTLMDMVRSMLSNSTLPIYLWMYALKTAMYLLNRVPSKAVSKTPFELW 587
Query: 241 NGWKTSLSHLHIWGCPTEVRIYNPHIKKLDSRTTNGYFIGYAVNSKGFRFYCPSHSQRIV 300
G SL HLH+WGC E+RIYNP KKLD+RT +GYFIGY SKG+ FYCP+H+ RIV
Sbjct: 588 TGRTPSLRHLHVWGCQAEIRIYNPQEKKLDARTISGYFIGYPEKSKGYMFYCPNHNMRIV 647
Query: 301 EARNAKFFEDFDSSGRDFPCRIEFEETREEPELPVDTRDLVIVQRSQPDIIAQQPTLEQP 360
E NA+F E+ + SG P ++E +E R + L + + V V + ++
Sbjct: 648 ETGNARFIENGEVSGSTIPQKVEVKEVRMQVPLTYASGNKVSVPLTVESNNNEEEQHNNE 707
Query: 361 --VHEEQIPQEPVPQIEHEDVVLRRSSRTRKPDISSDYLVYLQESDFDIG-PQRDPNSFS 417
+H E I ++P +++ LRRS R ++P IS+DY+VYL E + D + DP SFS
Sbjct: 708 PMIHNEPIVEQP------QEIALRRSQREKRPAISNDYMVYLHELENDSSINENDPVSFS 761
Query: 418 EAINGEKSALWYDAMMEEMESMAKNQVWDLVKLPKGSKAIGCKWVYKTKRDSSRNVERYK 477
+A++ + S W +AM EE++SM +N VWDLV+LP+G K +GCKWV+KTKRDS N+ERYK
Sbjct: 762 QAVSCDNSEKWLNAMKEELKSMEQNDVWDLVELPEGCKRVGCKWVFKTKRDSDGNLERYK 821
Query: 478 ARLVAKG 484
ARLVAKG
Sbjct: 822 ARLVAKG 828