BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g1030.1
(184 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP58075.1 Retrovirus-related Pol polyprotein from transposon TN... 294 3e-95
KYP31265.1 Retrovirus-related Pol polyprotein from transposon TN... 283 4e-92
KYP54444.1 Retrovirus-related Pol polyprotein from transposon TN... 273 3e-91
>KYP58075.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 519
Score = 294 bits (753), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 141/184 (76%), Positives = 159/184 (86%)
Query: 1 MALVAHFDLELHQMDVKTTFLNGHLGEEVYMVQPEGFRDENDHHLVCKLRKSIYGLKQAS 60
MALVAH+DLELHQMDVKT FLNG+L E VYM QP GF E H+VCKL+KSIYGLKQAS
Sbjct: 281 MALVAHYDLELHQMDVKTAFLNGNLEENVYMDQPMGFSVEGKEHMVCKLKKSIYGLKQAS 340
Query: 61 RQWYLKFHNVITSFGFTENIVDQFIYLKVSGSKYIFLVLYVDDILLATSDLGLLHETKEF 120
RQWYLKF++ I SFGF ENIVD+ IYLKVSGSK IFL+LYVDDILLAT+DLGLLHETK+F
Sbjct: 341 RQWYLKFNDTIVSFGFKENIVDRCIYLKVSGSKVIFLILYVDDILLATNDLGLLHETKKF 400
Query: 121 LSQNFEMKDLGEASYVIGIEIHRDRSKRSLGLSQKAYIERILERFRMHKCASLVAPIAKG 180
LS NFEMKD+GEASYVIGIEI RDRS+ LGLSQKAYI ++LERFRM KC++ PI KG
Sbjct: 401 LSSNFEMKDMGEASYVIGIEIFRDRSQGLLGLSQKAYINKVLERFRMEKCSASPVPIQKG 460
Query: 181 EKFT 184
+KF+
Sbjct: 461 DKFS 464
>KYP31265.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 425
Score = 283 bits (724), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 154/183 (84%)
Query: 1 MALVAHFDLELHQMDVKTTFLNGHLGEEVYMVQPEGFRDENDHHLVCKLRKSIYGLKQAS 60
MALVAHFD ELHQMDVKT FLNG+L EEVYM QPEGF + HLVCKL KSIYGLKQAS
Sbjct: 1 MALVAHFDFELHQMDVKTAFLNGNLEEEVYMKQPEGFFSSDGEHLVCKLNKSIYGLKQAS 60
Query: 61 RQWYLKFHNVITSFGFTENIVDQFIYLKVSGSKYIFLVLYVDDILLATSDLGLLHETKEF 120
RQWYLKFH VI+SFGF ENI+DQ +Y KVSGSK FLVLYVDDILLAT+D G+L+E K+F
Sbjct: 61 RQWYLKFHEVISSFGFEENIMDQCVYQKVSGSKICFLVLYVDDILLATNDKGMLYEVKQF 120
Query: 121 LSQNFEMKDLGEASYVIGIEIHRDRSKRSLGLSQKAYIERILERFRMHKCASLVAPIAKG 180
LS+NF+MKD+GEASYVIGI+IHR+RS+ LGLSQ+ YI ++LERF M C+ VAPI KG
Sbjct: 121 LSKNFDMKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFNMKDCSPSVAPIVKG 180
Query: 181 EKF 183
+K
Sbjct: 181 DKL 183
>KYP54444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 196
Score = 273 bits (698), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 130/184 (70%), Positives = 153/184 (83%)
Query: 1 MALVAHFDLELHQMDVKTTFLNGHLGEEVYMVQPEGFRDENDHHLVCKLRKSIYGLKQAS 60
M LVAH+DLELHQ+DVKT FLN +L E VYM QP GF +E H+VCKL+KSIYGLKQAS
Sbjct: 1 MVLVAHYDLELHQIDVKTAFLNENLEENVYMDQPVGFIEEGKEHMVCKLKKSIYGLKQAS 60
Query: 61 RQWYLKFHNVITSFGFTENIVDQFIYLKVSGSKYIFLVLYVDDILLATSDLGLLHETKEF 120
RQWY+KF++ I SFGF EN +D IYLKVSGSK+IFL+LYVDDILLAT+DLGLL ETK+F
Sbjct: 61 RQWYIKFNDTIMSFGFKENTIDWCIYLKVSGSKFIFLILYVDDILLATNDLGLLSETKKF 120
Query: 121 LSQNFEMKDLGEASYVIGIEIHRDRSKRSLGLSQKAYIERILERFRMHKCASLVAPIAKG 180
LS NFEMKD+GEA YVIGIEI D+S+ LGLSQKAYI ++LERFRM C++ PI KG
Sbjct: 121 LSNNFEMKDMGEAGYVIGIEIFHDKSQGLLGLSQKAYINKVLERFRMDTCSASPVPIQKG 180
Query: 181 EKFT 184
+KF+
Sbjct: 181 DKFS 184