BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g1130.1
(160 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_009139319.1 PREDICTED: uncharacterized protein LOC103863313 [... 137 1e-34
AAD08951.1 putative reverse transcriptase [Arabidopsis thaliana]... 135 7e-34
XP_013746189.1 PREDICTED: uncharacterized protein LOC106448916 [... 133 3e-33
>XP_009139319.1 PREDICTED: uncharacterized protein LOC103863313 [Brassica rapa]
Length = 1139
Score = 137 bits (345), Expect = 1e-34, Method: Composition-based stats.
Identities = 66/151 (43%), Positives = 96/151 (63%)
Query: 2 IEVFAVFIDREERAGRFLLHPKCLAPQVTHLCFADDLMVFFRVDASSAQSLKGLLTGFHQ 61
+ V + +D R + HPKC +THLCFADDLMVF S + + + F +
Sbjct: 590 MNVLSKMLDEAARRKKIGYHPKCKNLDLTHLCFADDLMVFSDGTKRSVEGILEVFEEFDK 649
Query: 62 ATGLQANVHKSTIFFACLSAQGQSDITTILKFGDSSLPVRYLGLPLISSRLTYSHCIPLI 121
TGL+ ++ KST+F A +S Q Q +I FG SLPVRYLGLPL++ +T S +PL+
Sbjct: 650 MTGLKISLEKSTLFMAGISRQKQEEILHHFPFGTGSLPVRYLGLPLLTKHMTVSDFLPLV 709
Query: 122 DKIKGRIQSWKSRFLSFAGRVLLIKVILNSI 152
+KI+ RI SW +RFLS+AGR+ LI+ +++S+
Sbjct: 710 EKIRKRIGSWTNRFLSYAGRLQLIQSVISSL 740
>AAD08951.1 putative reverse transcriptase [Arabidopsis thaliana] AAM14892.1
putative reverse transcriptase [Arabidopsis thaliana]
Length = 1412
Score = 135 bits (339), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 101/154 (65%), Gaps = 6/154 (3%)
Query: 2 IEVFAVFIDREERAGRFLLHPKCLAPQVTHLCFADDLMVFFRVDASSAQSLKGLLT---G 58
+ V + +D+ RF HP+C +THLCFADD+MVF A SA SL+G+L
Sbjct: 926 MNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVF---SAGSAHSLEGVLAIFKD 982
Query: 59 FHQATGLQANVHKSTIFFACLSAQGQSDITTILKFGDSSLPVRYLGLPLISSRLTYSHCI 118
F +GL ++ KST+F A +S++ + I F SLPVRYLGLPL++ R+T + C+
Sbjct: 983 FAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCL 1042
Query: 119 PLIDKIKGRIQSWKSRFLSFAGRVLLIKVILNSI 152
PL++KI+ RI SWK+RFLS+AGR+ L+ +++S+
Sbjct: 1043 PLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSL 1076
>XP_013746189.1 PREDICTED: uncharacterized protein LOC106448916 [Brassica napus]
XP_013746254.1 PREDICTED: uncharacterized protein
LOC106448993 [Brassica napus]
Length = 1451
Score = 133 bits (335), Expect = 3e-33, Method: Composition-based stats.
Identities = 63/151 (41%), Positives = 95/151 (62%)
Query: 2 IEVFAVFIDREERAGRFLLHPKCLAPQVTHLCFADDLMVFFRVDASSAQSLKGLLTGFHQ 61
+ V + +D + HPKC + ++THLCFADDLMVF S + + + F +
Sbjct: 955 MNVLSKMLDEAATKKKIGYHPKCESVELTHLCFADDLMVFADGTKGSIEGILRVFEEFDK 1014
Query: 62 ATGLQANVHKSTIFFACLSAQGQSDITTILKFGDSSLPVRYLGLPLISSRLTYSHCIPLI 121
+GL+ ++ KST+F A +SAQ Q +I + F LPVRYLGLPL++ +T +PLI
Sbjct: 1015 MSGLKISMEKSTLFLAGVSAQNQEEIMSHFPFASGKLPVRYLGLPLLTKNMTVLDYLPLI 1074
Query: 122 DKIKGRIQSWKSRFLSFAGRVLLIKVILNSI 152
+KI+ RI SW +R+LS+AGR+ LIK ++ S+
Sbjct: 1075 EKIRKRIGSWTARYLSYAGRLQLIKSVITSL 1105