BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0060.1
(411 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP36635.1 Retrovirus-related Pol polyprotein from transposon TN... 131 3e-31
XP_016192411.1 PREDICTED: uncharacterized protein LOC107633284 [... 125 2e-30
CAJ86192.1 H0306F03.15 [Oryza sativa Indica Group] 133 4e-30
>KYP36635.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 364
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 92/132 (69%), Gaps = 11/132 (8%)
Query: 232 CFNCKKEGHFKRNSHEFGKKPAEAAVIEEDDGSVLAINEDCDEAMVLAINDC--FAEDWW 289
C CK+ GH+K++ + KP+ AAV +E+ S + +VL+I D +ED W
Sbjct: 239 CNYCKEPGHWKKDCPKKKGKPS-AAVAKEESTS--------ENELVLSIADQPQHSEDQW 289
Query: 290 ILDTGCTFHVCLHKEWFSTYTVINGGKVLMGNDAPCKVVGIGTIQIKMHDGVVRSIKDIR 349
ILD+GC+FH+C ++ WF TY +GG V MGNDAPCK +GIGTI+IKMHDG+ R++ ++R
Sbjct: 290 ILDSGCSFHMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIKIKMHDGITRTLTEVR 349
Query: 350 HVPDFKRNLISL 361
HVP+ K+NLIS+
Sbjct: 350 HVPELKKNLISV 361
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 83 FLDTGCTFHVCLHKEWFSTYTVINGGKVLMGNDAPCKVVGIGTFKIKNHDG 133
LD+GC+FH+C ++ WF TY +GG V MGNDAPCK +GIGT KIK HDG
Sbjct: 290 ILDSGCSFHMCPNRTWFDTYEKKSGGNVFMGNDAPCKTIGIGTIKIKMHDG 340
>XP_016192411.1 PREDICTED: uncharacterized protein LOC107633284 [Arachis ipaensis]
Length = 215
Score = 125 bits (314), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 83/123 (67%), Gaps = 10/123 (8%)
Query: 241 FKRNSHEFGKKPAEAAVIEEDDGSVLAINEDCDEAMVLAINDCFAEDWWILDTGCTFHVC 300
FK+ +++ K+ EA+ + D+ ++ E E D WILD+G + H+C
Sbjct: 89 FKKQNNDNPKEKQEASYVSNDEEDCYSVTEQSYEIF----------DKWILDSGASHHMC 138
Query: 301 LHKEWFSTYTVINGGKVLMGNDAPCKVVGIGTIQIKMHDGVVRSIKDIRHVPDFKRNLIS 360
+++WF+TY INGG VLMGND CK VG+GT++IKMHDGVVR++KD+RH+PD ++NLIS
Sbjct: 139 PNRKWFTTYESINGGTVLMGNDHACKAVGLGTVRIKMHDGVVRTLKDVRHIPDLRKNLIS 198
Query: 361 LEL 363
+ L
Sbjct: 199 IGL 201
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 83 FLDTGCTFHVCLHKEWFSTYTVINGGKVLMGNDAPCKVVGIGTFKIKNHDG 133
LD+G + H+C +++WF+TY INGG VLMGND CK VG+GT +IK HDG
Sbjct: 128 ILDSGASHHMCPNRKWFTTYESINGGTVLMGNDHACKAVGLGTVRIKMHDG 178
>CAJ86192.1 H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 11/151 (7%)
Query: 220 RSRFKSKPKKYRCFNCKKEGH-------FKRNSHEFGKKPAEAAVIEEDDG-SVLAINED 271
R R KS+ + C CK++GH + GK + +ED+G + + +E
Sbjct: 41 RGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGK--KEDEGKAAVVTDEK 98
Query: 272 CDEAMVLAINDCF-AEDWWILDTGCTFHVCLHKEWFSTYTVINGGKVLMGNDAPCKVVGI 330
D +++A C D WILDT CT+H+C +++WF+TY V+ GG VLMG+D PC+V GI
Sbjct: 99 SDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGI 158
Query: 331 GTIQIKMHDGVVRSIKDIRHVPDFKRNLISL 361
GT+QIKM DG +R++ D+RH+P+ KR+LISL
Sbjct: 159 GTVQIKMFDGCIRTLSDVRHIPNLKRSLISL 189
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 33/101 (32%)
Query: 83 FLDTGCTFHVCLHKEWFSTYTVINGGKVLMGNDAPCKVVGIGTFKIKNHD---------- 132
LDT CT+H+C +++WF+TY V+ GG VLMG+D PC+V GIGT +IK D
Sbjct: 118 ILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVR 177
Query: 133 -----------------------GEGGVLQISKGSLTVMKG 150
G G+L+++KGSL VMK
Sbjct: 178 HIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKA 218