BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0070.1
(242 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN62092.1 hypothetical protein VITISV_022473 [Vitis vinifera] 194 2e-57
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 188 3e-52
KYP48513.1 Retrovirus-related Pol polyprotein from transposon TN... 188 3e-51
>CAN62092.1 hypothetical protein VITISV_022473 [Vitis vinifera]
Length = 318
Score = 194 bits (492), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 136/220 (61%), Gaps = 30/220 (13%)
Query: 14 TIKIKNHDGVVRSIKYIRHVPDFKRNLISLGTLDDNGCKFVGEGRVLQISKGSLTVMKGL 73
TI+IK HD ++ ++ +RHVP K+ LISLGTLD NGC + G VL+I KG+L VMKG
Sbjct: 70 TIQIKTHDDIIMTLIDLRHVPKLKKKLISLGTLDSNGCTYKAGGGVLRILKGALVVMKGN 129
Query: 74 KKNGLYPLQGNTVIGSVAVSLSDKEVETTKLLHMRLGHMSERGMAILSKQGLLYRQKLGK 133
K NGLY LQG T+IG+V VS+S+ +ETT+L HMRLGHMS++G+ ILSK+GLL QK G+
Sbjct: 130 KINGLYTLQGGTIIGAVVVSISESIIETTRLWHMRLGHMSDKGLTILSKRGLLDGQKTGE 189
Query: 134 LEFCEHFVFRKQCRVEFE--------------------------IDTPVEVRPQVDE--- 164
L+FCEH VF KQCRV+F I+ + ++P +E
Sbjct: 190 LDFCEHCVFGKQCRVKFSAGVHRTKENDPRMRENVEFVTKASETIEKAISIKPNEEEVQL 249
Query: 165 -QAEEDEPELVHYSVARNRGRRDIRAPERYGMTDMVAFAL 203
+E P+ Y + R+R RR I+ P+RY D++ L
Sbjct: 250 LDDKESAPQEQQYCLVRDRIRRQIKQPQRYAYADLLLMHL 289
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 188 bits (478), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 113/154 (73%)
Query: 1 MGNDAPCKVVGIGTIKIKNHDGVVRSIKYIRHVPDFKRNLISLGTLDDNGCKFVGEGRVL 60
MGND CK+ GIGTI+IK HDG ++++ +R +PD KRNLISLGTL+ GCK+ EG VL
Sbjct: 317 MGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVL 376
Query: 61 QISKGSLTVMKGLKKNGLYPLQGNTVIGSVAVSLSDKEVETTKLLHMRLGHMSERGMAIL 120
++SKG++ ++K + LY LQG+ V GS AVS S + + TKL HMRLGHMSE+GM +L
Sbjct: 377 KVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLL 436
Query: 121 SKQGLLYRQKLGKLEFCEHFVFRKQCRVEFEIDT 154
SKQGLL Q +GKLEFCEH VF KQ RV F T
Sbjct: 437 SKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTAT 470
>KYP48513.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1032
Score = 188 bits (477), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 113/154 (73%)
Query: 1 MGNDAPCKVVGIGTIKIKNHDGVVRSIKYIRHVPDFKRNLISLGTLDDNGCKFVGEGRVL 60
MGND CK+ GIGTI+IK HDG ++++ +R +PD KRNLISLGTL+ GCK+ EG VL
Sbjct: 21 MGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVL 80
Query: 61 QISKGSLTVMKGLKKNGLYPLQGNTVIGSVAVSLSDKEVETTKLLHMRLGHMSERGMAIL 120
++SKG++ ++K + LY LQG+ V GS AVS S + + TKL HMRLGHMSE+GM +L
Sbjct: 81 KVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLL 140
Query: 121 SKQGLLYRQKLGKLEFCEHFVFRKQCRVEFEIDT 154
SKQGLL Q +GKLEFCEH VF KQ RV F T
Sbjct: 141 SKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTAT 174