BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0130.1
(460 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAT64405.1 Beta-(1-->2)glucan export ATP-binding/permease protei... 64 1e-07
XP_002447488.1 hypothetical protein SORBIDRAFT_06g001776, partia... 59 1e-05
EES11815.2 hypothetical protein SORBI_006G019000 [Sorghum bicolor] 58 1e-05
>JAT64405.1 Beta-(1-->2)glucan export ATP-binding/permease protein NdvA
[Anthurium amnicola]
Length = 349
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 18 SQMTQGDLDTLRKDHVIHASVKLLLASSEDKIYLYDDCRVGVYEVFFNLGLVVPFPVFLV 77
S +T + +K++ + V LL + + + + + +YE FF G P P F+V
Sbjct: 132 STVTPEECRLWQKEYDVPEGVDLLAPNPDFRALTPIEFQFSMYEGFFEAGFRFPIPSFVV 191
Query: 78 DLMNYYGLRLFQMNPNVVMTIMAFYFLCLHLGEKASLFAFDKTFSLKSSDKCWHYFSSRV 137
L+ +Y Q+ PN I + LC+ K +L F K FS++++ + S+R
Sbjct: 192 ALLCFYNQAPAQLTPNSWRLIFCYLVLCIIYSRKPNLLVFRKLFSMRTTGSHYSCLSARR 251
Query: 138 GPFF------FTPNIPKVYKDKFFFCSSL 160
G F F+ N K YK +FFF SS+
Sbjct: 252 GTHFLSLSPKFSSN--KGYKSRFFFASSV 278
>XP_002447488.1 hypothetical protein SORBIDRAFT_06g001776, partial [Sorghum
bicolor]
Length = 451
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 46 EDKIYLYDDCRVGVYEVFFNLGLVVPFPVFLVDLMNYYGLRLFQMNPNVVMTIMAFYFLC 105
ED I++Y D G+ +P F V+++ +YGL Q+ P+ + AF L
Sbjct: 90 EDTIFVYADA--------LEAGMRIPLHDFYVEVLGHYGLAPSQLEPDAWRYMAAFLMLS 141
Query: 106 LHLGEKASLFAFDKTFSLKSSDK---CWHYFSSRVGPFFFTPNIPKV------YKDKFFF 156
+ + SL AF FS+ + D WH+F SR G F +P +K +FF
Sbjct: 142 MDADVEPSLPAFRSFFSICTHDGGSVGWHHFRSRPGSCLFNVKVPGSPDPDPEWKSRFFL 201
Query: 157 CSS 159
S
Sbjct: 202 LRS 204
>EES11815.2 hypothetical protein SORBI_006G019000 [Sorghum bicolor]
Length = 506
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 46 EDKIYLYDDCRVGVYEVFFNLGLVVPFPVFLVDLMNYYGLRLFQMNPNVVMTIMAFYFLC 105
ED I++Y D G+ +P F V+++ +YGL Q+ P+ + AF L
Sbjct: 143 EDTIFVYADA--------LEAGMRIPLHDFYVEVLGHYGLAPSQLEPDAWRYMAAFLMLS 194
Query: 106 LHLGEKASLFAFDKTFSLKSSDK---CWHYFSSRVGPFFFTPNIPKV------YKDKFFF 156
+ + SL AF FS+ + D WH+F SR G F +P +K +FF
Sbjct: 195 MDADVEPSLPAFRSFFSICTHDGGSVGWHHFRSRPGSCLFNVKVPGSPDPDPEWKSRFFL 254
Query: 157 CSS 159
S
Sbjct: 255 LRS 257