BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0280.1
(414 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP53356.1 Retrovirus-related Pol polyprotein from transposon TN... 384 e-127
KYP48513.1 Retrovirus-related Pol polyprotein from transposon TN... 385 e-121
KYP57305.1 Retrovirus-related Pol polyprotein from transposon TN... 361 e-117
>KYP53356.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 384 bits (986), Expect = e-127, Method: Compositional matrix adjust.
Identities = 177/268 (66%), Positives = 217/268 (80%)
Query: 42 PKGQKIVVSKWVFKKKEGIPGVEDARYNARLVAKGFTQREGINFNEVFSPVVKHSSIRVI 101
PKG++ + KW++KKK+GIPGVED R ARLV KGF Q+EGI+FNE+FSPVV+H+SIR++
Sbjct: 20 PKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEGIDFNEIFSPVVRHTSIRIL 79
Query: 102 LAMVALYDMELEQLDVKTLFLHGELEEQIYMRQSEGFEILKKEDQVCLLKKTLYGLKQSP 161
LA VAL+D+ELEQLDVKT FLHGELEE+IYM Q EGF + KE VC LKK+LYGLKQ+P
Sbjct: 80 LAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSLYGLKQAP 139
Query: 162 RQWYKRFGTFMVKNGYDRSRYDSCVYHKKLPDGSYVYLLMYVDDMLIACKDMSVIHILKD 221
RQWYK+F +FM+ GY RS+YD C+Y ++ PDG+++YLL+YVDDMLIA +D S+I LK
Sbjct: 140 RQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSLISKLKA 199
Query: 222 QLKGEFEMKDLGASRKILGMEIQRDRSAGKLFLSQKTYIEKVLERFGMTGAKPFDTPLGA 281
QL EFEMK+LGA++KILGMEI RDR GKLFLSQ+ YIE++L+RF M KP TPL A
Sbjct: 200 QLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVSTPLAA 259
Query: 282 HFKLSGDLSPTIDEETEYMSRVPYANAV 309
HFKLS DL P EE E MS VPYA+AV
Sbjct: 260 HFKLSSDLCPQTKEEMERMSHVPYASAV 287
>KYP48513.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1032
Score = 385 bits (988), Expect = e-121, Method: Compositional matrix adjust.
Identities = 177/268 (66%), Positives = 217/268 (80%)
Query: 42 PKGQKIVVSKWVFKKKEGIPGVEDARYNARLVAKGFTQREGINFNEVFSPVVKHSSIRVI 101
PKG++ + KW++KKK+GIPGVED R ARLV KGF Q+EGI+FNE+FSPVV+H+SIR++
Sbjct: 549 PKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEGIDFNEIFSPVVRHTSIRIL 608
Query: 102 LAMVALYDMELEQLDVKTLFLHGELEEQIYMRQSEGFEILKKEDQVCLLKKTLYGLKQSP 161
LA VAL+D+ELEQLDVKT FLHGELEE+IYM Q EGF + KE VC LKK+LYGLKQ+P
Sbjct: 609 LAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSLYGLKQAP 668
Query: 162 RQWYKRFGTFMVKNGYDRSRYDSCVYHKKLPDGSYVYLLMYVDDMLIACKDMSVIHILKD 221
RQWYK+F +FM+ GY RS+YD C+Y ++ PDG+++YLL+YVDDMLIA +D S+I LK
Sbjct: 669 RQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSLISKLKA 728
Query: 222 QLKGEFEMKDLGASRKILGMEIQRDRSAGKLFLSQKTYIEKVLERFGMTGAKPFDTPLGA 281
QL EFEMK+LGA++KILGMEI RDR GKLFLSQ+ YIE++L+RF M KP TPL A
Sbjct: 729 QLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVSTPLAA 788
Query: 282 HFKLSGDLSPTIDEETEYMSRVPYANAV 309
HFKLS DL P EE E MS VPYA+AV
Sbjct: 789 HFKLSSDLCPQTKEEMERMSHVPYASAV 816
>KYP57305.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 530
Score = 361 bits (926), Expect = e-117, Method: Compositional matrix adjust.
Identities = 169/270 (62%), Positives = 211/270 (78%)
Query: 40 PQPKGQKIVVSKWVFKKKEGIPGVEDARYNARLVAKGFTQREGINFNEVFSPVVKHSSIR 99
P P+G K V KWV K+KEGIPGVE +R+ ARLVAKGF+Q+EGI+++EVFSPVVKH +IR
Sbjct: 229 PLPRGVKPVGCKWVLKRKEGIPGVEPSRFKARLVAKGFSQKEGIDYHEVFSPVVKHKTIR 288
Query: 100 VILAMVALYDMELEQLDVKTLFLHGELEEQIYMRQSEGFEILKKEDQVCLLKKTLYGLKQ 159
V+LAMV+ DM+LEQL+VK FLHG LEEQ+YM Q +GF + K++ VCLLKK+LYGLKQ
Sbjct: 289 VLLAMVSALDMKLEQLNVKIAFLHGNLEEQVYMSQPDGFLEVGKKNHVCLLKKSLYGLKQ 348
Query: 160 SPRQWYKRFGTFMVKNGYDRSRYDSCVYHKKLPDGSYVYLLMYVDDMLIACKDMSVIHIL 219
SPRQWYKRF FM+ + R+ +D+CVY +KL DGSY+YLL+YVDDMLIA K + I L
Sbjct: 349 SPRQWYKRFDAFMISYNFVRNEFDNCVYSRKLSDGSYIYLLLYVDDMLIAAKSKTDIDAL 408
Query: 220 KDQLKGEFEMKDLGASRKILGMEIQRDRSAGKLFLSQKTYIEKVLERFGMTGAKPFDTPL 279
K L EFEMKDLG ++KILGMEI RDR+AG L++SQK YIEK+L+ F M +KP TPL
Sbjct: 409 KAMLSSEFEMKDLGTAKKILGMEIWRDRNAGLLYVSQKKYIEKLLQSFQMENSKPVSTPL 468
Query: 280 GAHFKLSGDLSPTIDEETEYMSRVPYANAV 309
HFKL P+ +EE EYM+ VPY++AV
Sbjct: 469 ATHFKLDASTLPSTNEEKEYMNTVPYSSAV 498