BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0360.1
(194 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN61270.1 hypothetical protein VITISV_020532 [Vitis vinifera] 243 6e-77
KYP34568.1 Retrovirus-related Pol polyprotein from transposon TN... 234 3e-73
KYP36195.1 Copia protein [Cajanus cajan] 233 4e-72
>CAN61270.1 hypothetical protein VITISV_020532 [Vitis vinifera]
Length = 369
Score = 243 bits (620), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 149/203 (73%), Gaps = 12/203 (5%)
Query: 4 NKANSNFAKIVGQSDKITYKCTHCNKIGHTKSHCYELLGYPEWWDHNR---KKNSKKT-- 58
+++ +N KI DK T+KCTHCNK GHTKS C+E++GYP+WWDHN KK+SKKT
Sbjct: 130 DQSKTNHPKINPNIDKSTFKCTHCNKTGHTKSCCFEIMGYPDWWDHNHDQWKKDSKKTST 189
Query: 59 -------LVDPIVKQASSTVATTGNVGKTLNMSTQFKNSTWIIDSGATDHMTFDSRQVST 111
+ + ++AS+ VA T GK LN ST NS WIIDSGATDHMTFDSRQVS
Sbjct: 190 AAVAEIKIETNVTEKASALVAATDYGGKFLNTSTPVINSAWIIDSGATDHMTFDSRQVSP 249
Query: 112 INQSSHKFVSTANGTSATVVGEGPITLTNTLNLDSVLVVPSLDHNLLSVSQITTTLFCVV 171
SS K VS ANG + V+ +G +TLT+TLNLDS+LVVPSLD+NLLSVSQITTTL C+V
Sbjct: 250 FRPSSQKIVSIANGNTTPVIRKGSLTLTDTLNLDSILVVPSLDYNLLSVSQITTTLSCIV 309
Query: 172 IFWPEFCVFKDIRTRQTIGYGVR 194
IFWPEFCVFKDI+ RQ IG G++
Sbjct: 310 IFWPEFCVFKDIQIRQMIGCGIK 332
>KYP34568.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 373
Score = 234 bits (596), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 144/199 (72%), Gaps = 23/199 (11%)
Query: 4 NKANSNFAKIVGQSDKITYKCTHCNKIGHTKSHCYELLGYPEWWDHNRKKNSKKT----- 58
+KANSNF KCTHCN+ GHTKS C+EL GYPEWWDH+R + K
Sbjct: 91 SKANSNF------------KCTHCNQQGHTKSRCFELNGYPEWWDHSRDQRRKNPTTAVV 138
Query: 59 ---LVDPIVKQASSTVATTGNVGKTLNMSTQFKNSTWIIDSGATDHMTFDSRQVSTINQS 115
++D K++S+ +AT GN G+ S NSTWIIDS ATDHMTFDSRQ+S++ S
Sbjct: 139 EAKIIDDASKESSALMATRGNNGE---FSIPITNSTWIIDSDATDHMTFDSRQISSMKPS 195
Query: 116 SHKFVSTANGTSATVVGEGPITLTNTLNLDSVLVVPSLDHNLLSVSQITTTLFCVVIFWP 175
S + +STANG + +V+G+G +TLTN L LDS+LVVPSL++NLLSVSQITT L CVVIFWP
Sbjct: 196 SKELISTANGNTTSVIGKGSLTLTNNLTLDSILVVPSLEYNLLSVSQITTALNCVVIFWP 255
Query: 176 EFCVFKDIRTRQTIGYGVR 194
FCVFKDI+T+QTIGYGV+
Sbjct: 256 NFCVFKDIQTKQTIGYGVK 274
>KYP36195.1 Copia protein [Cajanus cajan]
Length = 460
Score = 233 bits (595), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 141/190 (74%), Gaps = 17/190 (8%)
Query: 17 SDKITYKCTHCNKIGHTKSHCYELLGYPEWWDHNR---KKNSKKTLV---------DPIV 64
SDK +YKCTHCN+ GHTK C+EL+GYPEWWDHNR KKNS K D +
Sbjct: 217 SDKSSYKCTHCNQNGHTKDRCFELVGYPEWWDHNRDSRKKNSNKNPTVATIESKSEDSAI 276
Query: 65 KQASSTVATTGNVGKTLNMSTQFKNSTWIIDSGATDHMTFDSRQVSTINQSSHKFVSTAN 124
++ S+ V T VGK LN+S NSTWIIDSGATDH+TF SRQVS + K V AN
Sbjct: 277 ERQSALVTATNFVGKALNISEHNLNSTWIIDSGATDHITFGSRQVSPL-----KPVCAAN 331
Query: 125 GTSATVVGEGPITLTNTLNLDSVLVVPSLDHNLLSVSQITTTLFCVVIFWPEFCVFKDIR 184
G + +++GEG +TLTN+LNLDSVLVVP L++NLLSVS+ITT+L CVVIFWPEFCVFKDI+
Sbjct: 332 GNTTSIIGEGSLTLTNSLNLDSVLVVPDLNYNLLSVSKITTSLSCVVIFWPEFCVFKDIQ 391
Query: 185 TRQTIGYGVR 194
TRQTIG G++
Sbjct: 392 TRQTIGCGIK 401