BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0390.1
(225 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP63120.1 Retrovirus-related Pol polyprotein from transposon TN... 300 6e-97
BAA11674.1 unnamed protein product [Nicotiana tabacum] 316 1e-96
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN... 307 2e-93
>KYP63120.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 501
Score = 300 bits (767), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 147/251 (58%), Positives = 177/251 (70%), Gaps = 33/251 (13%)
Query: 1 MDKTKPMSYPLASHFKLTRDQCPSTRSEKEEMKKIPYASDVGSLMYAMVCTEPDITFAVG 60
MDK KP++ PLA HF+L+ Q P++ E EEMKKIPY+S VGSLMYAM+CT PDI +AVG
Sbjct: 246 MDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAYAVG 305
Query: 61 VVRRFLANPGKEHWLAVKWILKYLRDTSKARICFG------------------------- 95
VV RFLANPG EHWLAVKWIL+YLR TSK +CFG
Sbjct: 306 VVSRFLANPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLEGYTDADLAGDIDSRKSTS 365
Query: 96 --------GVVSWQSKSQKCLALSTTEEEYIAITECCKEMLWMKRLLEELGIKQDNYVIH 147
G VSWQSK QKC+ALSTTE EYIA TE CKEMLWMK +L ELG+ Q+ YV+
Sbjct: 366 GYLTTFVGGAVSWQSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVDQERYVLK 425
Query: 148 CDSQSAIHLSKNSSFHSKSKHINVRYQWIQDVLEEKVLKIEKIHADDNGSDMMTKPLPKG 207
CD+QSAI+L+KNS+FHS++KHI+ RY WI++VLEEK L ++K+H D+N SDMMTK +P
Sbjct: 426 CDNQSAIYLAKNSTFHSRTKHIDTRYHWIREVLEEKKLHLDKVHTDENWSDMMTKVIPTK 485
Query: 208 KHELCRSVAGL 218
K E C AGL
Sbjct: 486 KFEDCCQGAGL 496
>BAA11674.1 unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 316 bits (809), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 152/251 (60%), Positives = 182/251 (72%), Gaps = 33/251 (13%)
Query: 1 MDKTKPMSYPLASHFKLTRDQCPSTRSEKEEMKKIPYASDVGSLMYAMVCTEPDITFAVG 60
M+KTK +S PLA+HF+L+ Q PST E+ +M++IPYAS VGSLMYAMVCT PDI AVG
Sbjct: 1076 MEKTKAVSCPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPDIAHAVG 1135
Query: 61 VVRRFLANPGKEHWLAVKWILKYLRDTSKARICFG------------------------- 95
VV RFL+NPGKEHW AVKWIL+YLR TSK +CFG
Sbjct: 1136 VVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFGEDNPVLVGYTDADMAGDVDSRKSTS 1195
Query: 96 --------GVVSWQSKSQKCLALSTTEEEYIAITECCKEMLWMKRLLEELGIKQDNYVIH 147
G VSWQSK QKC+ALSTTE E+IA TE CKE++WMK+ L ELG QD Y +
Sbjct: 1196 GYLINFSGGAVSWQSKLQKCVALSTTEAEFIAATEACKELIWMKKFLTELGFSQDGYQLF 1255
Query: 148 CDSQSAIHLSKNSSFHSKSKHINVRYQWIQDVLEEKVLKIEKIHADDNGSDMMTKPLPKG 207
CDSQSAIHL+KN+SFHS+SKHI+VRY WI+DVLE+K+L++EKIH D+NGSDM+TK LPKG
Sbjct: 1256 CDSQSAIHLAKNASFHSRSKHIDVRYNWIRDVLEKKMLRLEKIHTDENGSDMLTKTLPKG 1315
Query: 208 KHELCRSVAGL 218
K E CR AG+
Sbjct: 1316 KFEFCREAAGI 1326
>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1314
Score = 307 bits (786), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 149/252 (59%), Positives = 181/252 (71%), Gaps = 34/252 (13%)
Query: 1 MDKTKPMSYPLASHFKLTRDQCPSTRSEKEEMKKIPYASDVGSLMYAMVCTEPDITFAVG 60
M K + PL H KL++ QCP EKEEM K+PY+S VGSLMYAMVCT PDI +AVG
Sbjct: 1060 MHNAKSVHVPLPGHLKLSKKQCP-VNEEKEEMSKVPYSSAVGSLMYAMVCTRPDIAYAVG 1118
Query: 61 VVRRFLANPGKEHWLAVKWILKYLRDTSKARICFG------------------------- 95
VV RFL+NPGKEHW AVKWIL+YL+ T+K+ +CFG
Sbjct: 1119 VVSRFLSNPGKEHWNAVKWILRYLKGTAKSCLCFGNGNLMLTGYSDADMAGDVDSRKSTS 1178
Query: 96 --------GVVSWQSKSQKCLALSTTEEEYIAITECCKEMLWMKRLLEELGIKQDNYVIH 147
G +SWQS+ QKC+ALSTTE E+IAITE CKE+LWMK+ L+ELG Q++YV++
Sbjct: 1179 GYLITFAGGAISWQSRLQKCIALSTTEAEFIAITEGCKEILWMKKFLQELGQDQESYVLY 1238
Query: 148 CDSQSAIHLSKNSSFHSKSKHINVRYQWIQDVLEEKVLKIEKIHADDNGSDMMTKPLPKG 207
CDSQSAIHLSKNS+FHS+SKHI+VRY WI+DVLE K+LKIEKIH DNG+DMMTK LP+
Sbjct: 1239 CDSQSAIHLSKNSTFHSRSKHIDVRYHWIRDVLESKMLKIEKIHTKDNGADMMTKSLPRE 1298
Query: 208 KHELCRSVAGLG 219
K E+C+ VAGL
Sbjct: 1299 KIEVCKEVAGLA 1310