BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0410.1
(143 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN74178.1 hypothetical protein VITISV_029257 [Vitis vinifera] 223 2e-67
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN... 228 8e-67
XP_010317772.1 PREDICTED: uncharacterized protein LOC104646206 [... 212 9e-66
>CAN74178.1 hypothetical protein VITISV_029257 [Vitis vinifera]
Length = 623
Score = 223 bits (569), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 101/143 (70%), Positives = 118/143 (82%)
Query: 1 MKTKDQVLTVFKNFHNMVERETGKSLKCIRTDNGGEYIWSFEEYCKTHGIRHEQTVPKTP 60
+K+KDQVL FK+FH VER+TGK LK +R +NGGEY FE YCK+HGI E+TVPKTP
Sbjct: 150 LKSKDQVLDXFKDFHVKVERQTGKQLKSVRANNGGEYRGLFEXYCKSHGIXLEKTVPKTP 209
Query: 61 QQNGVAERINRTIVERIRCMLAEAKLPKSFWGEAMRTACYLINLSPSAPLDGDVAERVWA 120
QQNGV ER+NRTI +RIRCML+ AKLPKSFWGEAMRT LINLSPS PL+GD+ ER+W
Sbjct: 210 QQNGVVERMNRTICDRIRCMLSHAKLPKSFWGEAMRTVVDLINLSPSYPLEGDILERIWT 269
Query: 121 GKEVSYGHLRVFGCRPFVHIPKD 143
GK VS+ HLRVFGCR FVH+P+D
Sbjct: 270 GKFVSFEHLRVFGCRAFVHVPRD 292
>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1314
Score = 228 bits (581), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 102/143 (71%), Positives = 119/143 (83%)
Query: 1 MKTKDQVLTVFKNFHNMVERETGKSLKCIRTDNGGEYIWSFEEYCKTHGIRHEQTVPKTP 60
+KTKDQVL FK FH +VER TG+ LKCIRTDNGGEY+ FE YCKTHGIRHE+ PKTP
Sbjct: 513 LKTKDQVLQAFKEFHALVERATGRKLKCIRTDNGGEYLGPFEYYCKTHGIRHEKVPPKTP 572
Query: 61 QQNGVAERINRTIVERIRCMLAEAKLPKSFWGEAMRTACYLINLSPSAPLDGDVAERVWA 120
Q NGVAER+NRTI E++R ML+ AK+PKSFWGEA+ TA LINLSPS PL+G++ E VW+
Sbjct: 573 QMNGVAERMNRTIAEKVRSMLSHAKIPKSFWGEAVLTAADLINLSPSRPLNGEIPEEVWS 632
Query: 121 GKEVSYGHLRVFGCRPFVHIPKD 143
GK+ YGHL+VFGCR FVHIPKD
Sbjct: 633 GKKAYYGHLKVFGCRAFVHIPKD 655
>XP_010317772.1 PREDICTED: uncharacterized protein LOC104646206 [Solanum
lycopersicum]
Length = 346
Score = 212 bits (539), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 93/137 (67%), Positives = 112/137 (81%)
Query: 1 MKTKDQVLTVFKNFHNMVERETGKSLKCIRTDNGGEYIWSFEEYCKTHGIRHEQTVPKTP 60
K+KDQVL VFK+F +VER+TGK+LKCIR+DNGGEYI F+ YCK GIRH++ PKTP
Sbjct: 161 FKSKDQVLDVFKSFQALVERQTGKTLKCIRSDNGGEYIGPFDRYCKEQGIRHQKAPPKTP 220
Query: 61 QQNGVAERINRTIVERIRCMLAEAKLPKSFWGEAMRTACYLINLSPSAPLDGDVAERVWA 120
Q NG+AERINRT+VER+RCML++AKL SFW EA+ TA Y+INLSP+ LDGDV +RVW
Sbjct: 221 QLNGLAERINRTLVERVRCMLSDAKLSDSFWAEALNTAAYVINLSPAVVLDGDVPDRVWT 280
Query: 121 GKEVSYGHLRVFGCRPF 137
GK SY HLRVFGC+ F
Sbjct: 281 GKNASYDHLRVFGCKAF 297