BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0750.1
(439 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BAH93014.1 Os05g0235100, partial [Oryza sativa Japonica Group] 473 e-157
ABA93844.2 retrotransposon protein, putative, unclassified [Oryz... 481 e-157
XP_002489126.1 hypothetical protein SORBIDRAFT_0019s003280, part... 471 e-157
>BAH93014.1 Os05g0235100, partial [Oryza sativa Japonica Group]
Length = 841
Score = 473 bits (1218), Expect = e-157, Method: Compositional matrix adjust.
Identities = 233/439 (53%), Positives = 306/439 (69%), Gaps = 2/439 (0%)
Query: 1 LDYSETFSPVVKSSTIRAVLTIAVTNHWHIKQLDVSNSFLHGVLDEDVFMTQPTGFVDSS 60
+DY ETFSPVVK +TI VL+IA + W I QLDV N+FLHG L+E V+ QP+GFVD S
Sbjct: 402 IDYDETFSPVVKPATIHVVLSIAASRSWPIHQLDVKNAFLHGNLEETVYYQQPSGFVDPS 461
Query: 61 KKDWVCHLHKSLYGLKQAPRAWYTKFASFLLDFGFQKSATDHSMFVYQAQGDTLVLLLYV 120
+ VC L KSLYGLKQAPRAWY +FA+++ GF SA++ S+FVY+ + LLLYV
Sbjct: 462 APNAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASNTSLFVYKDGDNIAYLLLYV 521
Query: 121 DDIILTGSSTDLLHSLVLSLQEAFAMKDLGSLHYFLGIEVSSLPSSSGLLLTQNKYTLEL 180
DDIILT SS LLH + L FAM DLG LH+FLGI V+ SS GL L+Q +Y ++L
Sbjct: 522 DDIILTASSATLLHHITARLHSEFAMTDLGDLHFFLGISVTR--SSDGLFLSQRQYVVDL 579
Query: 181 LQKAELFDSKPMATPIPFGKRLSKDDGILLEDPTHYRSLVGGLQYLTMTRPDIAFGVNYV 240
L++A + + ATP+ +LS DG + DPT YRSLVG LQYLT+TRP++A+ V V
Sbjct: 580 LKRAGMSECHSTATPVDARSKLSATDGAPVSDPTEYRSLVGALQYLTLTRPELAYAVQQV 639
Query: 241 AQVMQAPRDVHLQMVKRIFRYLKGSLGSGISIKPGDYTSLTAYSDSDWAGCPDSRRSTCG 300
M PR+ HL ++KRI RY+KG+L G+ + SLTAYSD+DWAGCPDS RST G
Sbjct: 640 CLFMHDPREPHLALIKRILRYIKGTLHIGLHLGTTPVDSLTAYSDADWAGCPDSHRSTSG 699
Query: 301 FCVFLGSTLVAWCSKKQPTVARSSTEAEYKALALASSELLWLSYVLTELGVNVHTPYVLK 360
+CVFLG LV+W SK+Q TV+RSS EAEY+A+A A +E WL +L+EL +++ + V+
Sbjct: 700 YCVFLGDNLVSWSSKRQTTVSRSSAEAEYRAVAHAIAECCWLRQLLSELHISLTSATVVY 759
Query: 361 CDNLGAQHLATNPVFHARTKHVEIDYHFVRELVASGTLRLDYVSSQNQLADVFTKGLSNP 420
CDN+ A ++A NPV H RTKH+EID HFVRE VA G +R+ ++ S +Q AD+ TKGL
Sbjct: 760 CDNVSAVYMAANPVHHRRTKHIEIDIHFVREKVALGQVRVLHLPSSHQFADIMTKGLPVQ 819
Query: 421 LFLSLLSNLMMFSSKSSSA 439
LF S+L + + +S+A
Sbjct: 820 LFTEFRSSLCVRDNPASTA 838
>ABA93844.2 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1099
Score = 481 bits (1237), Expect = e-157, Method: Compositional matrix adjust.
Identities = 233/429 (54%), Positives = 310/429 (72%), Gaps = 2/429 (0%)
Query: 1 LDYSETFSPVVKSSTIRAVLTIAVTNHWHIKQLDVSNSFLHGVLDEDVFMTQPTGFVDSS 60
+D+ ETFSPVVK +T+R VL++AVT W + QLDV N+FLHG L E V+ TQP+GF D++
Sbjct: 670 IDFDETFSPVVKPATVRTVLSLAVTRQWPVHQLDVKNAFLHGALQETVYCTQPSGFEDTT 729
Query: 61 KKDWVCHLHKSLYGLKQAPRAWYTKFASFLLDFGFQKSATDHSMFVYQAQGDTLVLLLYV 120
+ D VC L+KSLYGLKQAPRAWY++FAS+LL GF K+ +D S+F+Y D + LLLYV
Sbjct: 730 RPDMVCRLNKSLYGLKQAPRAWYSRFASYLLTLGFTKAKSDTSLFIYHRGSDLVYLLLYV 789
Query: 121 DDIILTGSSTDLLHSLVLSLQEAFAMKDLGSLHYFLGIEVSSLPSSSGLLLTQNKYTLEL 180
DDI+LT SS LL + +LQ F+MKDLG+LH+FLGI V+S SSGLLL+Q +Y++E+
Sbjct: 790 DDIVLTASSAGLLRWAIQALQAEFSMKDLGTLHHFLGITVTS--DSSGLLLSQRQYSIEI 847
Query: 181 LQKAELFDSKPMATPIPFGKRLSKDDGILLEDPTHYRSLVGGLQYLTMTRPDIAFGVNYV 240
L++A + D KP +TP+ +LS DG + DPT YRSL LQYLT TRPDI++ V V
Sbjct: 848 LERAGMSDCKPCSTPVDTNAKLSSTDGSPVLDPTDYRSLASALQYLTFTRPDISYVVQQV 907
Query: 241 AQVMQAPRDVHLQMVKRIFRYLKGSLGSGISIKPGDYTSLTAYSDSDWAGCPDSRRSTCG 300
M PRD HL +KRI RY++G+L G+ I+ T L AYSD++WAGCPD+R+ST G
Sbjct: 908 CLHMHDPRDSHLATLKRILRYVRGTLDLGLHIRHSPSTDLVAYSDANWAGCPDTRKSTSG 967
Query: 301 FCVFLGSTLVAWCSKKQPTVARSSTEAEYKALALASSELLWLSYVLTELGVNVHTPYVLK 360
+ VFLG LV+W SK+Q TV+RSS EAEY+A+A A +E WL +L EL ++
Sbjct: 968 YAVFLGDNLVSWSSKRQHTVSRSSAEAEYRAMANAVAETCWLRQLLHELHTPPSKATLVY 1027
Query: 361 CDNLGAQHLATNPVFHARTKHVEIDYHFVRELVASGTLRLDYVSSQNQLADVFTKGLSNP 420
CDN+ A +L+TNPV H RTKHVEID HFVR+ VA G++R+ +V + +Q AD+FTKGL +
Sbjct: 1028 CDNVSAVYLSTNPVQHQRTKHVEIDLHFVRDRVAVGSVRVLHVPTTSQYADIFTKGLPSS 1087
Query: 421 LFLSLLSNL 429
LF+ S+L
Sbjct: 1088 LFVEFRSSL 1096
>XP_002489126.1 hypothetical protein SORBIDRAFT_0019s003280, partial [Sorghum
bicolor]
Length = 761
Score = 471 bits (1211), Expect = e-157, Method: Compositional matrix adjust.
Identities = 230/429 (53%), Positives = 302/429 (70%), Gaps = 2/429 (0%)
Query: 1 LDYSETFSPVVKSSTIRAVLTIAVTNHWHIKQLDVSNSFLHGVLDEDVFMTQPTGFVDSS 60
+DY ETFSPVVK +TIR VLT+A + W I QLDV N+FLHG L E V+ +QPTGF DS+
Sbjct: 322 IDYDETFSPVVKPATIRTVLTLAHSRQWPIHQLDVKNAFLHGTLSETVYCSQPTGFADST 381
Query: 61 KKDWVCHLHKSLYGLKQAPRAWYTKFASFLLDFGFQKSATDHSMFVYQAQGDTLVLLLYV 120
VC L+KSLYGLKQAPRAW++ FAS LL GF ++ +D S+F++ +T LLLYV
Sbjct: 382 HPTHVCKLNKSLYGLKQAPRAWHSCFASHLLSLGFSEARSDTSLFIFHRGTETAYLLLYV 441
Query: 121 DDIILTGSSTDLLHSLVLSLQEAFAMKDLGSLHYFLGIEVSSLPSSSGLLLTQNKYTLEL 180
DDI+LT SS LLH ++ +L++AFAMKDLG LH+FLG+ V + L L+Q +YTL++
Sbjct: 442 DDIVLTASSQQLLHRVIEALKKAFAMKDLGPLHHFLGMHVEQ--QGNSLFLSQRQYTLDI 499
Query: 181 LQKAELFDSKPMATPIPFGKRLSKDDGILLEDPTHYRSLVGGLQYLTMTRPDIAFGVNYV 240
+ + + D KP +TP+ ++S DG + DPT YRSL G LQYLT TRPDIA+ V +
Sbjct: 500 ITRNGMSDCKPCSTPVDTCAKVSASDGPSVTDPTAYRSLAGALQYLTFTRPDIAYAVQQI 559
Query: 241 AQVMQAPRDVHLQMVKRIFRYLKGSLGSGISIKPGDYTSLTAYSDSDWAGCPDSRRSTCG 300
M PR+ HL KRI RYLKG+L G+ I + LT Y+D+DWAGCPD+RRST G
Sbjct: 560 CLHMHDPRESHLTAAKRILRYLKGTLDYGLVIPRSSPSQLTVYTDADWAGCPDTRRSTSG 619
Query: 301 FCVFLGSTLVAWCSKKQPTVARSSTEAEYKALALASSELLWLSYVLTELGVNVHTPYVLK 360
+ VFLGS+LV+W SK+QPTV+RSS EAEY+A+A +E WL +L EL + + ++
Sbjct: 620 YAVFLGSSLVSWSSKRQPTVSRSSAEAEYRAVANGVAEASWLHQLLQELHHPMSSACLVY 679
Query: 361 CDNLGAQHLATNPVFHARTKHVEIDYHFVRELVASGTLRLDYVSSQNQLADVFTKGLSNP 420
CDN+ A +L+TNPV H RTKHVEID HFVRE VA G +R+ +V + +Q ADVFTKGL +
Sbjct: 680 CDNVSAVYLSTNPVQHQRTKHVEIDLHFVRERVAIGVVRVLHVPTTSQFADVFTKGLPSS 739
Query: 421 LFLSLLSNL 429
+F S+L
Sbjct: 740 VFTDFRSSL 748