BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0930.1
(344 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_015870114.1 PREDICTED: U5 small nuclear ribonucleoprotein 40 ... 643 0.0
KHN34668.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Gl... 639 0.0
XP_010271801.1 PREDICTED: U5 small nuclear ribonucleoprotein 40 ... 639 0.0
>XP_015870114.1 PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein
[Ziziphus jujuba]
Length = 345
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/345 (87%), Positives = 321/345 (93%), Gaps = 1/345 (0%)
Query: 1 MQAVSSEGGNALALGGPRPMEWSTVPHNASQAPG-SGKQRTSSLESPIMLLAGHQSAVYT 59
MQ +EG NAL++ GPRPMEWSTVP++A QAPG SGKQRTSSLESPIMLL GHQSAVYT
Sbjct: 1 MQVAPTEGENALSIVGPRPMEWSTVPYSAPQAPGQSGKQRTSSLESPIMLLVGHQSAVYT 60
Query: 60 MKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVVDLQWTTDGNQIISASPDK 119
MKFNPAG VIASGSHDKEIFLWNVHGDCKNFMVLKGHKNA++DL WTTDG+QIISASPDK
Sbjct: 61 MKFNPAGTVIASGSHDKEIFLWNVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDK 120
Query: 120 TLRAWDVETGKQIKKMVEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTFP 179
TLRAWDVETGKQIKKM EHSSFVNSCCPSRRGPPL+VSGSDDGTAKLWD+RQRGAIQTFP
Sbjct: 121 TLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP 180
Query: 180 DKYQITAVGFSDASDKIFTGGIDNDVKVWDIRRNEVTMTLQGHSDTITGMQLSPDGSYLL 239
DKYQITAV FSDASDKIFTGGIDNDVKVWD+R+ EVTMTLQGH D ITGM LSPDGSYLL
Sbjct: 181 DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVTMTLQGHQDMITGMSLSPDGSYLL 240
Query: 240 TNAMDGSLRIWDLRPYAPQNRCVKIFTGHQHNFEKNLLKCSWSPDGSKVTAGSADRMVYI 299
TN MD L IWD+RPYAPQNRCVKIF GHQHNFEKNLLKCSWS DGSKVTAGS+DRMVYI
Sbjct: 241 TNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSSDGSKVTAGSSDRMVYI 300
Query: 300 WDTTSRRVLYMLPGHNGSVNECVFHPTEPIIGSCSSDKQIFLGEI 344
WDTT+RR+LY LPGH GSVNECVFHP+EPIIGSCSSDKQI+LGEI
Sbjct: 301 WDTTTRRILYKLPGHTGSVNECVFHPSEPIIGSCSSDKQIYLGEI 345
>KHN34668.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Glycine soja]
Length = 345
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/345 (86%), Positives = 322/345 (93%), Gaps = 1/345 (0%)
Query: 1 MQAVSSEGGNALALGGPRPMEWSTVPHNASQAPG-SGKQRTSSLESPIMLLAGHQSAVYT 59
MQ SEG +AL++ GPRPMEWSTVP+NA QAPG +GKQRTSSLESPIMLL+GHQSA+YT
Sbjct: 1 MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT 60
Query: 60 MKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVVDLQWTTDGNQIISASPDK 119
MKFNPAG+VIASGSHD+EIFLWNVHGDCKNFMVLKGHKNAV+DL WTTDG QI+SASPDK
Sbjct: 61 MKFNPAGSVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDK 120
Query: 120 TLRAWDVETGKQIKKMVEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTFP 179
T+RAWDVETGKQIKKMVEH S+VNSCCPSRRGPPLVVSGSDDGTAKLWD+RQRG+IQTFP
Sbjct: 121 TVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP 180
Query: 180 DKYQITAVGFSDASDKIFTGGIDNDVKVWDIRRNEVTMTLQGHSDTITGMQLSPDGSYLL 239
DKYQITAVGFSDASDKIFTGGIDNDVK+WD+R+ EVTMTLQGH D IT MQLSPDGSYLL
Sbjct: 181 DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITAMQLSPDGSYLL 240
Query: 240 TNAMDGSLRIWDLRPYAPQNRCVKIFTGHQHNFEKNLLKCSWSPDGSKVTAGSADRMVYI 299
TN MD L IWD+RPYAPQNRCVK+ GHQHNFEKNLLKC WSPDGSKVTAGS+DRMVYI
Sbjct: 241 TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI 300
Query: 300 WDTTSRRVLYMLPGHNGSVNECVFHPTEPIIGSCSSDKQIFLGEI 344
WDTTSRR+LY LPGHNGSVNECVFHP EPIIGSCSSDKQI+LGEI
Sbjct: 301 WDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345
>XP_010271801.1 PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein
[Nelumbo nucifera] XP_010271802.1 PREDICTED: U5 small
nuclear ribonucleoprotein 40 kDa protein [Nelumbo
nucifera]
Length = 346
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/346 (87%), Positives = 322/346 (93%), Gaps = 2/346 (0%)
Query: 1 MQAVSSEGGNALALGGPRP-MEWSTVPHNASQAPG-SGKQRTSSLESPIMLLAGHQSAVY 58
MQ EG NALA+ GPRP MEWST+P+NA APG +GK RTSSLESPIMLLAGHQSA+Y
Sbjct: 1 MQGFPREGENALAVMGPRPGMEWSTIPYNAPPAPGPNGKPRTSSLESPIMLLAGHQSAIY 60
Query: 59 TMKFNPAGNVIASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVVDLQWTTDGNQIISASPD 118
TMKFNPAG +IASGSHDKEIFLWNVHGDCKNFMVLKGHKNA++D+QWTTDG+QIISASPD
Sbjct: 61 TMKFNPAGTIIASGSHDKEIFLWNVHGDCKNFMVLKGHKNAILDVQWTTDGSQIISASPD 120
Query: 119 KTLRAWDVETGKQIKKMVEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRQRGAIQTF 178
KTLRAWDVETGKQIKKM EHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWD+RQRGA+QTF
Sbjct: 121 KTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAVQTF 180
Query: 179 PDKYQITAVGFSDASDKIFTGGIDNDVKVWDIRRNEVTMTLQGHSDTITGMQLSPDGSYL 238
PDKYQITAV FSDASDKIFTGGIDNDVKVWD+RRNEVTMTLQGH+D IT MQLSPDGSYL
Sbjct: 181 PDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRRNEVTMTLQGHTDMITAMQLSPDGSYL 240
Query: 239 LTNAMDGSLRIWDLRPYAPQNRCVKIFTGHQHNFEKNLLKCSWSPDGSKVTAGSADRMVY 298
LTN MD LRIWD+RPYAP++RCVKIF GHQHNFEKNLLKCSWSPDGSKVT+GSADRMVY
Sbjct: 241 LTNGMDCFLRIWDMRPYAPKDRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTSGSADRMVY 300
Query: 299 IWDTTSRRVLYMLPGHNGSVNECVFHPTEPIIGSCSSDKQIFLGEI 344
IWDTTSRR+LY LPGH GSVNECVFHP EPIIGSCSSDKQI+LGE
Sbjct: 301 IWDTTSRRILYKLPGHTGSVNECVFHPNEPIIGSCSSDKQIYLGEF 346