BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g0940.1
(302 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_008243040.1 PREDICTED: 60S ribosomal protein L5 [Prunus mume] 547 0.0
XP_006371546.1 hypothetical protein POPTR_0019s13040g [Populus t... 546 0.0
XP_017236716.1 PREDICTED: 60S ribosomal protein L5 [Daucus carot... 545 0.0
>XP_008243040.1 PREDICTED: 60S ribosomal protein L5 [Prunus mume]
Length = 298
Score = 547 bits (1410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 261/298 (87%), Positives = 281/298 (94%)
Query: 1 MAFVKAQKSRAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
MAFVKAQKS+AY+KRFQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI
Sbjct: 1 MAFVKAQKSKAYYKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 61 IAQIISATITGDMVLASAYAHELPGYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
+AQI+SA+I GD+VLA+AYAHELP YGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE
Sbjct: 61 VAQILSASIAGDLVLAAAYAHELPSYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
Query: 121 GNVEATGEDFSVEPTESRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHSEKRFA 180
GNVEATGED+SVEP ESRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLDIPHSEKRFA
Sbjct: 121 GNVEATGEDYSVEPAESRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSEKRFA 180
Query: 181 GFKKDDKQLDAELHRKYIYGGHVAAYMGTLMEDEPEKYQTHFSQYVKKGVDAEGIETLYK 240
GF KD KQLD E+HRKYIYGGHVAAYM TLMEDEPEKYQTHFS Y+KKG++A+ IE +YK
Sbjct: 181 GFSKDSKQLDPEVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSDYIKKGIEADNIEAVYK 240
Query: 241 KVHAAIRADPTPKKSEKEQPKQHKRYNLKKLTYDERKNKLIERLNALNSAAGGEDDDD 298
KVHAAIRADPT KK EK+ PK+HKRYNLKKLTY+ERKNKLIERLNA NSAA DDD+
Sbjct: 241 KVHAAIRADPTAKKIEKQPPKEHKRYNLKKLTYEERKNKLIERLNAFNSAAQDHDDDE 298
>XP_006371546.1 hypothetical protein POPTR_0019s13040g [Populus trichocarpa]
ABK95061.1 unknown [Populus trichocarpa] ERP49343.1
hypothetical protein POPTR_0019s13040g [Populus
trichocarpa]
Length = 297
Score = 546 bits (1407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 262/297 (88%), Positives = 281/297 (94%)
Query: 1 MAFVKAQKSRAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
MAF KAQKSRAYFKR+QVKFKRRR GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI
Sbjct: 1 MAFAKAQKSRAYFKRYQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 61 IAQIISATITGDMVLASAYAHELPGYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
IAQI SA+I GD+VLASAYAHELP YGLE GLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61 IAQIASASIAGDIVLASAYAHELPRYGLEAGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
Query: 121 GNVEATGEDFSVEPTESRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHSEKRFA 180
GNVEATGEDFSVEP +SRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPADSRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
Query: 181 GFKKDDKQLDAELHRKYIYGGHVAAYMGTLMEDEPEKYQTHFSQYVKKGVDAEGIETLYK 240
GF KD+KQLDAE+HRKYIYGGHVAAYM TLMEDEPEKYQ+HFS+Y+K+G+DA+G+E LYK
Sbjct: 181 GFAKDNKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFSEYLKRGIDADGMEALYK 240
Query: 241 KVHAAIRADPTPKKSEKEQPKQHKRYNLKKLTYDERKNKLIERLNALNSAAGGEDDD 297
KVHAAIRADPT KKSEK+ PK+HKRYNLKKLTY+ERK KL+ERLNALNSAA EDD+
Sbjct: 241 KVHAAIRADPTAKKSEKQPPKEHKRYNLKKLTYEERKAKLVERLNALNSAADDEDDE 297
>XP_017236716.1 PREDICTED: 60S ribosomal protein L5 [Daucus carota subsp. sativus]
Length = 301
Score = 545 bits (1405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 265/293 (90%), Positives = 275/293 (93%)
Query: 1 MAFVKAQKSRAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
M FVKA K RAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI
Sbjct: 1 MVFVKANKPRAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 61 IAQIISATITGDMVLASAYAHELPGYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYE 120
AQIISA+I GDMVLASAY+HELP YGLEVGLTNYAAAYCTGLLLARRVLKKLEMD+EYE
Sbjct: 61 TAQIISASIAGDMVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDEEYE 120
Query: 121 GNVEATGEDFSVEPTESRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHSEKRFA 180
GNVEATGED+SVEP ESRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHSEKRFA
Sbjct: 121 GNVEATGEDYSVEPAESRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHSEKRFA 180
Query: 181 GFKKDDKQLDAELHRKYIYGGHVAAYMGTLMEDEPEKYQTHFSQYVKKGVDAEGIETLYK 240
GF KD KQLDAE+H KYIYGGHVAAYM TL+EDEPEKYQTHFS Y KKG+DA+ IE LYK
Sbjct: 181 GFSKDTKQLDAEVHHKYIYGGHVAAYMRTLIEDEPEKYQTHFSLYAKKGIDADNIEELYK 240
Query: 241 KVHAAIRADPTPKKSEKEQPKQHKRYNLKKLTYDERKNKLIERLNALNSAAGG 293
KVHAAIRADPT KKSEK QPK+HKRYNLKKLTYDERKNKLIERLNALN+AAG
Sbjct: 241 KVHAAIRADPTVKKSEKPQPKEHKRYNLKKLTYDERKNKLIERLNALNNAAGA 293