BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000076.1_g1020.1
(211 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP34377.1 Retrovirus-related Pol polyprotein from transposon TN... 228 2e-66
GAU16220.1 hypothetical protein TSUD_298520 [Trifolium subterran... 223 4e-65
KYP38661.1 Retrovirus-related Pol polyprotein from transposon TN... 219 9e-64
>KYP34377.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 938
Score = 228 bits (582), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 106/170 (62%), Positives = 137/170 (80%)
Query: 14 KWHTEVEGVNYHGTFAPVAKLVTVRVLLSLAFIQGWSLHQLDVNNVFLQGDLEEEVYMTI 73
K +T++EG++YH TFAPVAKLVTVR+LLS+A I+ WSLHQLDVNN FLQGDL EEVYM +
Sbjct: 690 KGYTQIEGIDYHDTFAPVAKLVTVRLLLSIAAIKNWSLHQLDVNNAFLQGDLNEEVYMKL 749
Query: 74 PPGFMSKGDTRVCRLNKSLYGLKQASGQWFPKFSSGLKAEGFSQSSPDHSLFSYFNGLTA 133
PPGF KG+T VC+L+KS+YGLKQAS QWF KFS+ L GF QS D+SLF+Y +G T+
Sbjct: 750 PPGFSRKGETYVCKLHKSIYGLKQASRQWFSKFSTTLIQRGFRQSISDYSLFTYISGQTS 809
Query: 134 IYTFVYVDDIIITDNDNKEIDSLRQRLEKRFSLKNFGRLQYFLGLEVSRS 183
++ VY+DDIIIT N++ I +++Q L + FS+K+ G L+YFL +EVSRS
Sbjct: 810 VFVLVYIDDIIITGNNDDAIFNIKQFLAQSFSIKDLGNLRYFLAIEVSRS 859
>GAU16220.1 hypothetical protein TSUD_298520 [Trifolium subterraneum]
Length = 801
Score = 223 bits (569), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 131/170 (77%)
Query: 14 KWHTEVEGVNYHGTFAPVAKLVTVRVLLSLAFIQGWSLHQLDVNNVFLQGDLEEEVYMTI 73
K +T+V+G++YH TFAPVAKLVTVR LLS+A I+ WSLHQLDVNN FLQGDL EEVYM +
Sbjct: 456 KGYTQVQGIDYHDTFAPVAKLVTVRRLLSIAAIKNWSLHQLDVNNAFLQGDLGEEVYMKL 515
Query: 74 PPGFMSKGDTRVCRLNKSLYGLKQASGQWFPKFSSGLKAEGFSQSSPDHSLFSYFNGLTA 133
PPGF KG VC+LNKS+YGLKQAS QWF KFS+ L +GF QS D+SLF+Y T
Sbjct: 516 PPGFSHKGKPCVCKLNKSIYGLKQASRQWFSKFSTTLIQKGFRQSISDYSLFTYICDQTT 575
Query: 134 IYTFVYVDDIIITDNDNKEIDSLRQRLEKRFSLKNFGRLQYFLGLEVSRS 183
I+ VYVDDIIIT N+ I ++Q L + FS+K+ G L+YFLG+EVSRS
Sbjct: 576 IFVLVYVDDIIITGNNEDAILDIKQFLAQSFSIKDLGHLRYFLGIEVSRS 625
>KYP38661.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 778
Score = 219 bits (558), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 103/170 (60%), Positives = 134/170 (78%)
Query: 14 KWHTEVEGVNYHGTFAPVAKLVTVRVLLSLAFIQGWSLHQLDVNNVFLQGDLEEEVYMTI 73
K + ++EG++YH TFAPVAKLV VR+LLS+A I+ WSLHQLDVNN FLQGDL EEVYM +
Sbjct: 404 KGYAQIEGIDYHDTFAPVAKLVIVRLLLSIAAIKNWSLHQLDVNNDFLQGDLNEEVYMKL 463
Query: 74 PPGFMSKGDTRVCRLNKSLYGLKQASGQWFPKFSSGLKAEGFSQSSPDHSLFSYFNGLTA 133
PP F KG+T VC+L+K +YGLKQAS QWF KFS+ + GF QS D+SLF+Y +G T+
Sbjct: 464 PPRFSRKGETYVCKLHKFIYGLKQASRQWFSKFSTTIIQRGFRQSISDYSLFTYISGQTS 523
Query: 134 IYTFVYVDDIIITDNDNKEIDSLRQRLEKRFSLKNFGRLQYFLGLEVSRS 183
++ VYVDDIIIT N++ I +++Q L + FS+K+ G L+YFLG+EVSRS
Sbjct: 524 VFVLVYVDDIIITSNNDDAIFNIKQFLAQSFSIKDHGNLRYFLGIEVSRS 573