BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000077.1_g0040.1
(93 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP51628.1 Retrovirus-related Pol polyprotein from transposon TN... 123 8e-33
KYP51292.1 Retrovirus-related Pol polyprotein from transposon TN... 124 1e-32
KYP36808.1 Retrovirus-related Pol polyprotein from transposon TN... 118 3e-32
>KYP51628.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 272
Score = 123 bits (308), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 68/86 (79%)
Query: 8 WVFKVKYKSDGSLERYKARLVAEGYTQQQGVDYQEPFSPVVKIQTVIVALTLAVTHQWLI 67
WV+K+K DGS+ERYKARLVA+GY+Q +GVDY + FSPVVK+ T+ V L +A H+W +
Sbjct: 30 WVYKIKRNPDGSIERYKARLVAKGYSQIEGVDYFDTFSPVVKMATIRVVLAIASVHRWTL 89
Query: 68 QQLGVSNAFLHADLTEDLYMKQPTGF 93
QQL VSNAFLH DLTED+YM P GF
Sbjct: 90 QQLDVSNAFLHGDLTEDVYMSLPPGF 115
>KYP51292.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 369
Score = 124 bits (312), Expect = 1e-32, Method: Composition-based stats.
Identities = 56/86 (65%), Positives = 67/86 (77%)
Query: 8 WVFKVKYKSDGSLERYKARLVAEGYTQQQGVDYQEPFSPVVKIQTVIVALTLAVTHQWLI 67
WV++VKYK DGS+ERYKARLVA+G+TQ +GVDY E FSPVVK+ TV L+LA H W +
Sbjct: 90 WVYRVKYKVDGSVERYKARLVAKGFTQTEGVDYFETFSPVVKLSTVRFLLSLAAAHNWFL 149
Query: 68 QQLGVSNAFLHADLTEDLYMKQPTGF 93
QL V NAFLH DL E++YMK P GF
Sbjct: 150 HQLDVDNAFLHGDLFEEVYMKPPPGF 175
>KYP36808.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 148
Score = 118 bits (295), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 69/86 (80%)
Query: 8 WVFKVKYKSDGSLERYKARLVAEGYTQQQGVDYQEPFSPVVKIQTVIVALTLAVTHQWLI 67
WVF +K DGS+ RYKARLVA+G+ QQQG+D+ E FSPV+K+ T+ + LTLA+T+ W I
Sbjct: 30 WVFSIKENVDGSINRYKARLVAKGFHQQQGLDFTETFSPVIKLVTIRIILTLAITNHWDI 89
Query: 68 QQLGVSNAFLHADLTEDLYMKQPTGF 93
QQ+ V+NAFL+ LTED+YM+QP GF
Sbjct: 90 QQIDVNNAFLNGHLTEDIYMEQPPGF 115