BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000077.1_g0050.1
(142 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP34377.1 Retrovirus-related Pol polyprotein from transposon TN... 239 2e-71
XP_011462193.1 PREDICTED: uncharacterized protein LOC105350894 [... 228 1e-67
KYP38661.1 Retrovirus-related Pol polyprotein from transposon TN... 224 8e-67
>KYP34377.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 938
Score = 239 bits (610), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 111/141 (78%), Positives = 123/141 (87%)
Query: 1 MTKEISALETNNTWSLTSLPPGKKPIGCKWVYKIKYRLDGSIERYKACLVAKGYTQVEGV 60
M KEI ALE+NNTWSL LP GK IGCKWVYKIKYR DGSIERYKACLVAKGYTQ+EG+
Sbjct: 639 MAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDGSIERYKACLVAKGYTQIEGI 698
Query: 61 DYHDTFAPVANLVTVCVLLSLASIQGWSLHQLDVNNAFLQGDLEEEGYMIIPPGFSNKGD 120
DYHDTFAPVA LVTV +LLS+A+I+ WSLHQLDVNNAFLQGDL EE YM +PPGFS KG+
Sbjct: 699 DYHDTFAPVAKLVTVRLLLSIAAIKNWSLHQLDVNNAFLQGDLNEEVYMKLPPGFSRKGE 758
Query: 121 TRVCRLKKSLYGLQQASTQWF 141
T VC+L KS+YGL+QAS QWF
Sbjct: 759 TYVCKLHKSIYGLKQASRQWF 779
>XP_011462193.1 PREDICTED: uncharacterized protein LOC105350894 [Fragaria vesca
subsp. vesca]
Length = 843
Score = 228 bits (580), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 103/141 (73%), Positives = 119/141 (84%)
Query: 1 MTKEISALETNNTWSLTSLPPGKKPIGCKWVYKIKYRLDGSIERYKACLVAKGYTQVEGV 60
M E++AL++N TWSL LPP K+PIGCKWVYK+K + DG++ERYKA LVAKGY+Q+EGV
Sbjct: 550 MRAEVAALQSNGTWSLVPLPPHKRPIGCKWVYKVKLKPDGNVERYKARLVAKGYSQIEGV 609
Query: 61 DYHDTFAPVANLVTVCVLLSLASIQGWSLHQLDVNNAFLQGDLEEEGYMIIPPGFSNKGD 120
DY +TFAPVA L TV VLLSLASIQGW LHQLDVNNAFL GDL EE YM +PPGF KG+
Sbjct: 610 DYRETFAPVAKLTTVRVLLSLASIQGWHLHQLDVNNAFLHGDLHEEVYMKLPPGFGGKGE 669
Query: 121 TRVCRLKKSLYGLQQASTQWF 141
TRVC+L KSLYGL+QAS QWF
Sbjct: 670 TRVCKLHKSLYGLKQASRQWF 690
>KYP38661.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 778
Score = 224 bits (572), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 105/141 (74%), Positives = 117/141 (82%)
Query: 1 MTKEISALETNNTWSLTSLPPGKKPIGCKWVYKIKYRLDGSIERYKACLVAKGYTQVEGV 60
M KEI ALE+NNTWSL LP GK IGCKWVYKIKYR DGSIERYKA LVAKGY Q+EG+
Sbjct: 353 MAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDGSIERYKARLVAKGYAQIEGI 412
Query: 61 DYHDTFAPVANLVTVCVLLSLASIQGWSLHQLDVNNAFLQGDLEEEGYMIIPPGFSNKGD 120
DYHDTFAPVA LV V +LLS+A+I+ WSLHQLDVNN FLQGDL EE YM +PP FS KG+
Sbjct: 413 DYHDTFAPVAKLVIVRLLLSIAAIKNWSLHQLDVNNDFLQGDLNEEVYMKLPPRFSRKGE 472
Query: 121 TRVCRLKKSLYGLQQASTQWF 141
T VC+L K +YGL+QAS QWF
Sbjct: 473 TYVCKLHKFIYGLKQASRQWF 493