BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000077.1_g0070.1
(259 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP34377.1 Retrovirus-related Pol polyprotein from transposon TN... 142 7e-35
GAU45704.1 hypothetical protein TSUD_86800 [Trifolium subterraneum] 130 5e-31
GAU31820.1 hypothetical protein TSUD_58210 [Trifolium subterraneum] 130 6e-31
>KYP34377.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 938
Score = 142 bits (357), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 118/229 (51%), Gaps = 28/229 (12%)
Query: 30 LSETILSIHPTSWIIDSGASNHVCFSLQHFSTSELAPPSVYVQIPDGSTLLVTHIGKVVF 89
L+ T L+ P SWIIDSGASNH C SL FS+ + VQ+PDGS LV HIG +
Sbjct: 61 LAGTALTHFPPSWIIDSGASNHTCTSLSFFSSYSSVHKHISVQLPDGSEALVIHIGTICC 120
Query: 90 FESLYIDNVYHIPTFKFNLIFVRQLCKSLHCLATFSPSQCVFTDTLTTRLIGQADDVGDL 149
SL + NV++IPTFKFNL+ + QL S +C A FS ++C+F D T + IG+ L
Sbjct: 121 SPSLTLTNVFYIPTFKFNLLSISQLTNSTNCDAIFSSTECIFQDRATKKTIGRGSARNGL 180
Query: 150 Y-------------------------ILRHKSSAL--TLH-KSLDLWLRRLGHPSLDRLK 181
+ L H SS+ +H LDLW RLGHPS R
Sbjct: 181 FYLSADLALNSTLFFKYSNKHDKDHSCLSHPSSSCFGFMHCNKLDLWHSRLGHPSKSRFN 240
Query: 182 HLSQRFDFIRFDYSHDCTIFSMAMQFKFPFHKSTSISTFPFPLVHADIW 230
+ + F I + C + A Q + PF +S+S ST F L+H DIW
Sbjct: 241 FIVRNFPNINANKDFICDVCPRAKQSRLPFSQSSSCSTHCFELIHVDIW 289
>GAU45704.1 hypothetical protein TSUD_86800 [Trifolium subterraneum]
Length = 902
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 111/202 (54%), Gaps = 8/202 (3%)
Query: 36 SIHPTSWIIDSGASNHVCFSLQHFSTSELAPPSVYVQIPDGSTLLVTHIGKVVFFESLYI 95
+I SWIIDSGAS+H+C SL F + P + +++P+G + G + F +SL I
Sbjct: 391 NISQGSWIIDSGASDHICGSLHWFDSYNQIKP-INIRLPNGHLTVAKIAGTIKFSDSLTI 449
Query: 96 DNVYHIPTFKFNLIFVRQLCKSLHCLATFSPSQCVFTDTLTTRLIGQADDVGDLYILRHK 155
+NV ++ F NLI V +LC +L C F+ S C+ + + R+IG A+ + DLY L +
Sbjct: 450 ENVLYVSDFTLNLISVSKLCHALGCTVLFNGSTCIIQERESKRMIGSAEQIEDLYYLALQ 509
Query: 156 -----SSALTLHKSLD--LWLRRLGHPSLDRLKHLSQRFDFIRFDYSHDCTIFSMAMQFK 208
+S ++ + LD LW RLGH S R+ + F F+ D + C + A Q K
Sbjct: 510 TKEVHASNVSTNSLLDSALWHFRLGHLSTSRMISMRSEFPFVNVDNNVVCDVCKYAKQRK 569
Query: 209 FPFHKSTSISTFPFPLVHADIW 230
FH S S ++ PF L+H DIW
Sbjct: 570 LVFHSSFSKASKPFELLHFDIW 591
>GAU31820.1 hypothetical protein TSUD_58210 [Trifolium subterraneum]
Length = 1409
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 132/251 (52%), Gaps = 24/251 (9%)
Query: 20 GHPRPPATT---LLSETILSIHPTSWIIDSGASNHVCFSLQHFSTSELAPPSVYVQIPDG 76
GHP +++ L + L+ + W++D GA++HVC S HFS+ P V++++P+G
Sbjct: 367 GHPPHESSSGILLTNVNSLTANHDYWLLDFGANDHVCSSYHHFSSFYPIKP-VHIKLPNG 425
Query: 77 STLLVTHIGKVVFFESLYIDNVYHIPTFKFNLIFVRQLCKSLHCLATFSPSQCVFTDTLT 136
+++V + G + F ESLY+ +V + P F NLI V +LCK+L+C F +C+ D +T
Sbjct: 426 HSVIVQYAGNIQFSESLYLTDVLYSPEFHLNLISVSKLCKNLNCSIQFFDHKCLLQDMIT 485
Query: 137 TRLIGQADDVGDLYILRHK-----SSAL--TLHKSLD-------------LWLRRLGHPS 176
++IG D V LY L++ S AL + KS++ LW RLGH S
Sbjct: 486 KKMIGLGDQVDGLYRLQYNHTFLASQALPQSFPKSINNVAVNSVVIPVSALWHFRLGHVS 545
Query: 177 LDRLKHLSQRFDFIRFDYSHDCTIFSMAMQFKFPFHKSTSISTFPFPLVHADIWVKEIYS 236
+RL +S+ + F+ D C + A + K PF+ S S + F L+H DIW S
Sbjct: 546 NNRLLRMSKLYPFLSIDNKAVCDVCQFARKRKLPFNSSYSTALHAFDLIHFDIWGPLAVS 605
Query: 237 KSKGMTFLIEI 247
G + + I
Sbjct: 606 SIHGHKYFLTI 616