BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000077.1_g0440.1
(117 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017613649.1 PREDICTED: uncharacterized mitochondrial protein ... 97 2e-23
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group] 94 2e-20
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 94 3e-20
>XP_017613649.1 PREDICTED: uncharacterized mitochondrial protein AtMg00820-like
[Gossypium arboreum]
Length = 144
Score = 96.7 bits (239), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 8/88 (9%)
Query: 38 QAPRRSQRLQE--------LSQKTDILLLEDNEPSTYNQAMTSPGSEKWLKAMRSEMDSM 89
Q PRRS R ++ DILL++ +EP T +A+ SP SEKWL+AM SEMDSM
Sbjct: 4 QPPRRSLREHHAPERYGFLITTHGDILLIDQDEPRTDQEAVASPDSEKWLEAMISEMDSM 63
Query: 90 SENQVWDLIDLPDGATPIGCKWVFKVKN 117
ENQVW L+D P+G PIGCKWVFK K
Sbjct: 64 YENQVWTLVDPPEGVKPIGCKWVFKKKT 91
>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 8/86 (9%)
Query: 37 AQAPRRSQRLQEL--------SQKTDILLLEDNEPSTYNQAMTSPGSEKWLKAMRSEMDS 88
A A RRS+R++ S + DILLL+++EP+TY +AM P +EKWL AM+SE++S
Sbjct: 623 APASRRSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMVGPDTEKWLGAMKSEIES 682
Query: 89 MSENQVWDLIDLPDGATPIGCKWVFK 114
M NQVW+L+D PDG I CKW+FK
Sbjct: 683 MHVNQVWNLVDPPDGVKAIECKWIFK 708
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Query: 37 AQAPRRSQRLQEL--SQKTDILLLEDNEPSTYNQAMTSPGSEKWLKAMRSEMDSMSENQV 94
A APRRS+R ++ DILLL ++EP+TY +AM P SEKWL AM+SE+DSM +NQV
Sbjct: 763 ASAPRRSKRPCQMPIRYAHDILLLNNDEPNTYKEAMMDPDSEKWLGAMKSEIDSMRDNQV 822
Query: 95 WDLIDLPDGATPIGCKWVFKVK 116
W+L+D DG I CKW++K K
Sbjct: 823 WNLVDPLDGVKTIECKWIYKKK 844