BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0030.1
(1023 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010495406.1 PREDICTED: uncharacterized protein LOC104772500 [... 302 3e-84
XP_009144136.1 PREDICTED: putative ribonuclease H protein At1g65... 277 4e-78
XP_013608089.1 PREDICTED: uncharacterized protein LOC106314815 [... 277 9e-78
>XP_010495406.1 PREDICTED: uncharacterized protein LOC104772500 [Camelina sativa]
Length = 955
Score = 302 bits (774), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 194/624 (31%), Positives = 298/624 (47%), Gaps = 81/624 (12%)
Query: 3 TQNAFVPSRQIMDNIVMTQEIIHSMH-NSKARNGGFSLKIDMAKAYDRVNWDFLHQVLRS 61
TQ+AFV R I DNI++ QE+ H ++ N + R+ + K DM+KAYDRV DFL V+
Sbjct: 152 TQSAFVSGRLITDNILVAQEMFHGLNTNQRCRSEFLAFKTDMSKAYDRVERDFLEAVMIK 211
Query: 62 IGLSGNFLRRILSCISTPQFSIQLNGSLHGSIVASRGIRQGCLLSPYLFLLVSQSLSLLI 121
+G ++ I+ C+S+ + + LNG G I RG+RQG LLSPYLF+L ++ L I
Sbjct: 212 LGFDRKWISWIMWCVSSVSYQVLLNGQPRGFIKPQRGLRQGDLLSPYLFILCTEVLIANI 271
Query: 122 SYYEANSLYSGYKINKNSPTISHLLFADDLILFGKANTTQLNIIMEILDTYSNFSGQRVN 181
E +G I ++SPTISHLLFADD + F KA + +MEI+ Y SGQ VN
Sbjct: 272 KKAEREKKVTGISIARDSPTISHLLFADDSLFFCKAEVAECQTVMEIIRNYGKASGQEVN 331
Query: 182 FNKSSIYFGKRVPSTVRSQFISSLQAPIMTNQAKYLGSFLLKPGNIIDSFSWLTEKFKNT 241
KSSI FGK+VPS +R Q S + G+ + F ++ ++ +
Sbjct: 332 LEKSSIMFGKKVPSELRDQLKSVI-------------------GSKMKVFGYVKDRLDDR 372
Query: 242 LSDWKSKLTSQAASE----------------------KKLHFINWQTICSSKENGGLGIR 279
++ W +KL S+ E + LH++ W +C K GGLG R
Sbjct: 373 VNGWNAKLLSKGGKEIMIKSVAVALPTHVMSCYKLPARGLHWVAWDNLCKDKCEGGLGFR 432
Query: 280 SLEEVNDSLIAKMRWRFLSEPTQKWVPLLQSKYIKSGTFWSIDIPYHSTPFWKAILHSRD 339
+LE+ ND+++AK WR + PT +L+ +Y ++ Y + W++I +++
Sbjct: 433 ALEQFNDAMLAKQYWRLIQYPTSLMARVLKGRYFRNKHPLMAKKSYDPSFAWRSIFSTKE 492
Query: 340 LIWNNIIWSIGDGNTVNIVSDPWLLDMPNKTPIPIQD-----LPSNIQKVRHLRNIDNTD 394
L+ + W++G G ++++ DPW+ P+ P LPS + V HL N D
Sbjct: 493 LVEHGAQWAVGSGCSISVWRDPWI---PDTRPRAANGRGRLWLPSLM--VNHLINPVTKD 547
Query: 395 WDYNILHTYFDSNSINAIKSVYFDHTVHHDKLIWTPTDHGRFTSKSCYHQLRNRPNLSNN 454
W L + D I I+S+ D+L+W T GR+T KS Y R L
Sbjct: 548 WHLPTLEEFLDPGDIPIIRSMVVSKVQQPDRLVWHFTKSGRYTVKSGYRLAR---ELMTE 604
Query: 455 INDFP-----WSKLWKNPNMNPRIQQFIWKIIHNGIATLGNIGKYNQSVIPFCKLCSNNE 509
+ P ++ WK ++ P++Q F W++ + L + CK C ++
Sbjct: 605 VEYGPSCMELRAQSWK-LDVPPKVQHFFWQVASGTLPVLERLAYRGVRCDTLCKRC-DSA 662
Query: 510 IETIMHLFGSCPKFKDFIIFTNNNKLLSLSEDP----ISNMKKILSNEGSRS-------- 557
ETI H CP+ +D ++ + LS P +N+ I S+S
Sbjct: 663 PETINHALFECPRSRD--VWGLSPVRLSPDGFPYVSIFANLDFIFWRAASQSGVPDVASR 720
Query: 558 LDWILYTHLIWVWWKARNDMIFNS 581
L WIL W WK RN +F
Sbjct: 721 LPWIL-----WSLWKDRNKKVFQG 739
>XP_009144136.1 PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 625
Score = 277 bits (709), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 304/599 (50%), Gaps = 36/599 (6%)
Query: 3 TQNAFVPSRQIMDNIVMTQEIIHSMHNSKARNGGF-SLKIDMAKAYDRVNWDFLHQVLRS 61
T AFV R I DNI++ ++H + +KA + ++K DM+KAYDRV W FL +L +
Sbjct: 33 THGAFVSERLISDNIIVAHGMVHGLRTNKAIGKQYMAIKTDMSKAYDRVEWSFLETLLEN 92
Query: 62 IGLSGNFLRRILSCISTPQFSIQLNGSLHGSIVASRGIRQGCLLSPYLFLLVSQSLSLLI 121
+G ++R ++SC++T ++I LNG HG I RGIRQG LSP+LF++ +++L ++
Sbjct: 93 MGFDHKWIRWVMSCVTTVSYTILLNGQTHGLIKRERGIRQGDPLSPFLFIVCAEALVHVL 152
Query: 122 SYYEANSLYSGYKINKNSPTISHLLFADDLILFGKANTTQLNIIMEILDTYSNFSGQRVN 181
+ E N G K++KN P + HLLFADD +L KA+T + +IM+ L Y + SGQ +N
Sbjct: 153 NVAEKNGKLHGIKLSKNGPAVHHLLFADDSLLMCKADTEESLVIMDCLKQYGDASGQEIN 212
Query: 182 FNKSSIYFGKRVPSTVRSQFISSLQAPIMTNQAKYLGSFL--LKPGNIIDSFSWLTEKFK 239
KSSI FG+++P+T + + L+ I + +++ S L + P +F + K
Sbjct: 213 KLKSSIIFGRKIPTTKKEEIKRILE--IDKKRWRWIVSRLTGVFPWIQAGAFKFYPRKTT 270
Query: 240 NTLSDWKSKLTSQAASEKKLHFINWQTICSSKENGGLGIRSLEEVNDSLIAKMRWRFLSE 299
++ + S +++KK+ +++WQ +C KE GG+G + +L+AK W L
Sbjct: 271 RQVAG----MWSNVSNKKKIAWVSWQRLCKRKEEGGMGFHDISSFK-ALLAKQAWCILQR 325
Query: 300 PTQKWVPLLQSKYIKSGTFWSIDIPYHSTPFWKAILHSRDLIWNNIIWSIGDGNTVNIVS 359
P + QSKY ++G+F + W++ILH R+L+ ++ IG+GN + +
Sbjct: 326 PNSLVARVFQSKYWRNGSFMDCGEGTRPSYAWRSILHGRELLVKGLVKRIGNGNATKVWT 385
Query: 360 DPWLLDMPNKTPIPIQDLPSNIQ-KVRHLRNIDNTDWDYNILHTYFDSNSINAIKSVY-F 417
+ WL + + P+ QD+ ++ V L WD L+ F + +I S+
Sbjct: 386 ENWLQNPIPREPMYKQDIVVDLTLNVADLLIPQTCLWDTLKLNELFIEEDVASILSIKPL 445
Query: 418 DHTVHHDKLIWTPTDHGRFTSKSCYHQLRNRPNLS--NNINDFPWSK-LWKN---PNMNP 471
H H +L W T G ++S+S Y + N+ N + P K LWKN P
Sbjct: 446 IHKEH--RLCWGFTREGSYSSQSGYKLIDTLKNMQVPGNGSLPPIEKSLWKNIWKLQTTP 503
Query: 472 RIQQFIWKIIHNGIATLGNIGKYNQSVIPFCKLCSNNEIETIMHLFGSCPKFKDFII--- 528
+I+ FIW+ + +A + V CK C + E+I H +CP +D
Sbjct: 504 KIRHFIWRAMAGALAVAEQLHYRGIPVDRTCKACGACQ-ESICHTLFNCPTARDTWSAAG 562
Query: 529 -------FTNNNKLLSLSEDPISNMKKILSNEGSRSLDWILYTHLIWVWWKARNDMIFN 580
+ N+ L++ K S + +S+ W+L W WKARN ++F
Sbjct: 563 LPLPERGLSQNSVFLNMHHLVACTKSKNCSTQLRQSIPWVL-----WQIWKARNVLVFE 616
>XP_013608089.1 PREDICTED: uncharacterized protein LOC106314815 [Brassica oleracea
var. oleracea]
Length = 653
Score = 277 bits (709), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 277/533 (51%), Gaps = 22/533 (4%)
Query: 4 QNAFVPSRQIMDNIVMTQEIIHSMHNSKA-RNGGFSLKIDMAKAYDRVNWDFLHQVLRSI 62
Q+AFV R I DNI+++ E++H + S+A ++ ++K DM+KAYDR+ WDF+ VL +
Sbjct: 58 QSAFVQKRAITDNILISHEVLHFLKTSQATKHCSMAVKTDMSKAYDRLKWDFIEAVLLQL 117
Query: 63 GLSGNFLRRILSCISTPQFSIQLNGSLHGSIVASRGIRQGCLLSPYLFLLVSQSLSLLIS 122
G + + I+ CI T +S +NGS G + RGIRQG LSPY+F++ S+ LS L
Sbjct: 118 GFNPTWTNLIMQCIRTVSYSFLINGSAQGLVKPKRGIRQGDPLSPYIFIMCSEVLSGLCR 177
Query: 123 YYEANSLYSGYKINKNSPTISHLLFADDLILFGKANTTQLNIIMEILDTYSNFSGQRVNF 182
+ G ++ + P+I+HLLFADD + F + N ++ +++IL Y SGQR+N
Sbjct: 178 KAQEEKCLQGIRVATHCPSINHLLFADDTLFFCRTNPKNVSALLKILSLYETASGQRINP 237
Query: 183 NKSSIYFGKRVPSTVRSQFISSLQAPIMTNQAKYLGSFLLKPGNIIDSFSWLTEKFKNTL 242
KS I F + P ++ + L KYLG D F+ + ++ +
Sbjct: 238 QKSGITFSHQAPLMLKENIKTELGIEKEEGAGKYLGVPEHFGRKKRDLFTAIVDRIRQRA 297
Query: 243 SDWKSKLTS--------QAASEKKLHFINWQTICSSKENGGLGIRSLEEVNDSLIAKMRW 294
+ ++ S ++A ++ + + W T+ SK +GGLG R ++ ND+L+AK+
Sbjct: 298 VRYATRYLSSVGKMTLLKSAGDRGMALVAWNTMVKSKSDGGLGFRDIQSFNDALLAKISL 357
Query: 295 RFLSEPTQKWVPLLQSKYIKSGTFWSIDIPYHSTPFWKAILHSRDLIWNNIIWSIGDGNT 354
R L+ P+ +L KY F ++ P + W+ IL RDL+ ++ W+IGDG +
Sbjct: 358 RILTSPSCLLARVLAGKYFHDQDFLTVQPPAACSHGWRGILIGRDLLKEHLGWAIGDGQS 417
Query: 355 VNIVSDPWLLDMPNKTPIPIQDLPSNIQKVRHLRNIDNTDWDYNILHTYFD--SNSINAI 412
D WL D+ + PI +L S++ KV L + DWD ++ +F SI +I
Sbjct: 418 ALAWQDSWLSDLSGASMGPIPELESSL-KVAELLQAQSRDWDEGKINHHFPLIYESIKSI 476
Query: 413 KSVYFDHTVHHDKLIWTPTDHGRFTSKSCYHQL--RNRPNL--SNNINDFPWSKLWKNPN 468
K + DK IW G +T+K+ Y+ +N+P++ + + LW +
Sbjct: 477 KPSKWGGA---DKRIWRKQASGIYTAKTGYYVALEKNKPDIPVAQEYSHDCIKDLW-SVK 532
Query: 469 MNPRIQQFIWKIIHNGIATLGNIGKYNQSVIPFCKLCSNNEIETIMHLFGSCP 521
M P+++ +WKI+H + +G + Q ++P K E+I+HLF CP
Sbjct: 533 MAPKLKLPLWKILHEAL-PVGELLVARQ-ILPSAKCIRCECPESILHLFYHCP 583