BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0070.1
(178 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP36170.1 Retrovirus-related Pol polyprotein from transposon TN... 230 2e-67
KYP39692.1 Retrovirus-related Pol polyprotein from transposon TN... 230 3e-67
XP_011470560.1 PREDICTED: uncharacterized protein LOC101303284 [... 226 3e-65
>KYP36170.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 953
Score = 230 bits (586), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 133/162 (82%)
Query: 17 NDVQPRRSERSTKGIPKFTYEPDINSKAKYPISDYVSTNRLSKSFTCTMNQLSSVSIPSN 76
+++Q RRSER KGIPK YEPD K KYPIS YVS++RLS+S+ T++QLS VSIP++
Sbjct: 514 HNIQIRRSERQNKGIPKPVYEPDPRVKVKYPISSYVSSHRLSESYALTVDQLSIVSIPNS 573
Query: 77 LQEALSDPRWKKAMNEEMNALPKNSTWELVDKPHGYRIVGCRWIFTVKTNPDGSVDRYKA 136
+QEAL DPRWK+AMN EM AL KN TW+L P G + +GC+W++TVK DGS+D+YKA
Sbjct: 574 VQEALEDPRWKQAMNIEMEALQKNETWKLTSLPSGKKTIGCKWVYTVKLKADGSIDKYKA 633
Query: 137 RLVSKGYTQTYGVDYEETFAPVAKINTIRVLISLAANQGWPL 178
RLV+KGYTQ YGVDY++TFAPVAK+NTIR+LIS+AAN+ WPL
Sbjct: 634 RLVAKGYTQKYGVDYQDTFAPVAKLNTIRILISIAANRDWPL 675
>KYP39692.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1082
Score = 230 bits (587), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 133/162 (82%)
Query: 17 NDVQPRRSERSTKGIPKFTYEPDINSKAKYPISDYVSTNRLSKSFTCTMNQLSSVSIPSN 76
+++Q RRSER KGIPK YEPD K KYPIS YVS++RLS+S+ T++QLS VSIP++
Sbjct: 514 HNIQIRRSERQNKGIPKPVYEPDPRVKVKYPISSYVSSHRLSESYALTVDQLSIVSIPNS 573
Query: 77 LQEALSDPRWKKAMNEEMNALPKNSTWELVDKPHGYRIVGCRWIFTVKTNPDGSVDRYKA 136
+QEAL DPRWK+AMN EM AL KN TW+L P G + +GC+W++TVK DGS+D+YKA
Sbjct: 574 VQEALEDPRWKQAMNIEMEALQKNETWKLTSLPSGKKTIGCKWVYTVKLKADGSIDKYKA 633
Query: 137 RLVSKGYTQTYGVDYEETFAPVAKINTIRVLISLAANQGWPL 178
RLV+KGYTQ YGVDY++TFAPVAK+NTIR+LIS+AAN+ WPL
Sbjct: 634 RLVAKGYTQKYGVDYQDTFAPVAKLNTIRILISIAANRDWPL 675
>XP_011470560.1 PREDICTED: uncharacterized protein LOC101303284 [Fragaria vesca
subsp. vesca]
Length = 1602
Score = 226 bits (575), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 136/178 (76%), Gaps = 3/178 (1%)
Query: 4 NVEPQVLLDP---ITVNDVQPRRSERSTKGIPKFTYEPDINSKAKYPISDYVSTNRLSKS 60
NV PQV LD V++ R+S+R TKGI K EPDI +K KYPI++Y+S +RL S
Sbjct: 294 NVPPQVSLDSNQLYEVDNFVTRKSQRVTKGISKKQDEPDIKAKTKYPIANYMSNHRLVGS 353
Query: 61 FTCTMNQLSSVSIPSNLQEALSDPRWKKAMNEEMNALPKNSTWELVDKPHGYRIVGCRWI 120
+NQLSSVSIPS +Q+ ++DP+W +AMNEE+ AL NSTW++V KP G + VGCRW+
Sbjct: 354 HALVINQLSSVSIPSTVQDVMTDPKWTQAMNEELEALQINSTWDIVPKPAGKKTVGCRWV 413
Query: 121 FTVKTNPDGSVDRYKARLVSKGYTQTYGVDYEETFAPVAKINTIRVLISLAANQGWPL 178
FTVK DGS+DRYKARLV+KGYTQ YG+DYEETFA VAKINT+R+LISLAA + WPL
Sbjct: 414 FTVKLKADGSIDRYKARLVAKGYTQRYGIDYEETFASVAKINTVRILISLAATKDWPL 471