BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0170.1
(615 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010256343.1 PREDICTED: pentatricopeptide repeat-containing pr... 831 0.0
CBI39683.3 unnamed protein product, partial [Vitis vinifera] 827 0.0
XP_002278925.2 PREDICTED: pentatricopeptide repeat-containing pr... 827 0.0
>XP_010256343.1 PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Nelumbo nucifera]
Length = 579
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/571 (67%), Positives = 466/571 (81%), Gaps = 1/571 (0%)
Query: 7 SRYHNFISLLQGCNNMIKFQKIHAQVILNGYQDDPIISNKLLNLCAVSISGNLEYARFLF 66
SR + ++LLQGCN+M + QKI A VI+NGYQDD ISNKLL+ CA+S+SG+L YA LF
Sbjct: 2 SRINGILNLLQGCNSMKRLQKIQAFVIVNGYQDDLAISNKLLSFCAISVSGSLAYAHLLF 61
Query: 67 SQFKFLQTSTWNSMIRGYSQSSTPLQAVFYYNHMMSQGLSRPDNFTFSFLLKACEKAKAE 126
+Q T+ WNSMIRG SQS +PL+A+ YN MM +G SRPD++TFSFLLKACEK+KAE
Sbjct: 62 NQINNPDTAAWNSMIRGLSQSPSPLKAILCYNSMMFEGQSRPDDYTFSFLLKACEKSKAE 121
Query: 127 KKCREVHGLITKSGYSNDVVVCTNLVRSYAGNELIGMARLLFDEMPERDLVCWNSMISCY 186
+KCRE HG I + GY+ DV VCTNL+RSY+ N I A+ +FD M +RDL+ WN+MISCY
Sbjct: 122 EKCREAHGSIIRCGYAEDVTVCTNLMRSYSANTSIECAQKVFDRMTQRDLISWNAMISCY 181
Query: 187 SQAGLHDEALKVYSRMRNSDVGLDEFTIVSLLSSCTHVGALNFGTQIHKFVDENGFMQNV 246
SQAGLHDEALK+Y +MR SD+GLD FT+VSLLSSC HVGALNFG +HKF +NGF+ NV
Sbjct: 182 SQAGLHDEALKIYDQMRISDLGLDAFTLVSLLSSCAHVGALNFGVHMHKFARQNGFLNNV 241
Query: 247 FVGNALIDMYAKCGSLDMSRWVFDRMRKRDVFSWNSIIIGLGVHGSGDEAIPFFEQMLTA 306
FVGNALIDMYAKCG+LD +R VFD MR+RDVF+WNS+I+GLGVHG GDEAI F+QML
Sbjct: 242 FVGNALIDMYAKCGNLDGARQVFDGMRRRDVFTWNSMIVGLGVHGHGDEAIQIFQQMLMT 301
Query: 307 RVQPNSITFLGLLCGCSHQGRIDEGIKYFKMMSSEFNIVPGIKHFGCMVDMFGRVGKLEE 366
+ P+S+TFLGLLCGCSHQG ++EG+KYF MM S+F++ PG KH+GCMVD++GR GKLEE
Sbjct: 302 GIHPSSVTFLGLLCGCSHQGLVEEGLKYFHMMRSDFSLKPGTKHYGCMVDLYGRAGKLEE 361
Query: 367 AMEFIDKSPTQEDPILWRTLLGACKIHKNVELGEVAMRHLVNLKALNAGDCVLLAGIYEA 426
A+EFI +SP +DP++WRTLLGACKIH+NV+ GE+ MR+LV L+ALNAGDCVLLA IY
Sbjct: 362 ALEFIQRSPVGDDPVIWRTLLGACKIHRNVKTGEIGMRNLVRLEALNAGDCVLLAAIYTQ 421
Query: 427 ARDQQGVARMRKLIKTQGIKTVPGWSWIEVDNNVHKFVVDDKSHDDSDLIYSKLKEIIHR 486
A D+QG ARMRKLI++Q KT PGWSWIEVD+ +H+FVV D+SH D++ IYS+LK++IHR
Sbjct: 422 AGDKQGAARMRKLIRSQKFKTTPGWSWIEVDDRIHRFVVGDRSHSDTEEIYSELKDVIHR 481
Query: 487 ATLVGYKVEDESLVSGCEIGEECYSNSGSYHSEKLAIAFGLANTSEGTSLRIVKNLRVCR 546
A L GY VE+ESL E E NS YHSEKLAIAFGLA T EG LRIVKNLRVCR
Sbjct: 482 AVLAGY-VEEESLTPVSEFTNEQSENSDRYHSEKLAIAFGLARTPEGNCLRIVKNLRVCR 540
Query: 547 DCHSFTKYVSKAFDRDIIVRDRVRFHHFKHG 577
DCHSFTK+VSKAF R+IIVRDRVRFHHFK G
Sbjct: 541 DCHSFTKFVSKAFKREIIVRDRVRFHHFKDG 571
>CBI39683.3 unnamed protein product, partial [Vitis vinifera]
Length = 585
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/569 (68%), Positives = 464/569 (81%), Gaps = 4/569 (0%)
Query: 13 ISLLQGCNNMIKFQKIHAQVILNGYQDDPIISNKLLNLCAVSISGNLEYARFLFSQFKFL 72
+SLLQGCN+M K KIHA +++NGYQ +P IS KLLN CAVS+SG+L YA+ +F +
Sbjct: 9 LSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNP 68
Query: 73 QTSTWNSMIRGYSQSSTPLQ--AVFYYNHMMSQGLSRPDNFTFSFLLKACEKAKAEKKCR 130
QT WNSMIRG+SQS +PLQ A+ +YNHM+S +RPD +TFSFLLKACE+AK E KCR
Sbjct: 69 QTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCR 128
Query: 131 EVHGLITKSGYSNDVVVCTNLVRSYAGNELIGMARLLFDEMPERDLVCWNSMISCYSQAG 190
EVHG I + GY DVV+CTNL+RSYAGN LI A +F+EMP RDLV WNSMISCY Q G
Sbjct: 129 EVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTG 188
Query: 191 LHDEALKVYSRMRNSDVGLDEFTIVSLLSSCTHVGALNFGTQIHKFVDENGFMQNVFVGN 250
LH+EALK+Y +MR S+VG D FT+VSLLSSC HVGAL+ G Q+H+F E ++N+FVGN
Sbjct: 189 LHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGN 248
Query: 251 ALIDMYAKCGSLDMSRWVFDRMRKRDVFSWNSIIIGLGVHGSGDEAIPFFEQMLTARVQP 310
ALIDMYAKCGSL + +F+ M KRDVF+WNS+I+G GVHG GDEAI FF ML A V+P
Sbjct: 249 ALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRP 308
Query: 311 NSITFLGLLCGCSHQGRIDEGIKYFKMMSSEFNIVPGIKHFGCMVDMFGRVGKLEEAMEF 370
NSITFLGLLCGCSHQG + EG++YF MMSSEFN+ PGIKH+GCMVD+FGR GKL+EA+E
Sbjct: 309 NSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEV 368
Query: 371 IDKSPTQEDPILWRTLLGACKIHKNVELGEVAMRHLVNLKALNAGDCVLLAGIYEAARDQ 430
I SP+Q DP+LWRTLLG+CKIH+NVE+GE+AMR+LV L +L AGDCVLL+GIY A+D
Sbjct: 369 IRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDL 428
Query: 431 QGVARMRKLIKTQGIKTVPGWSWIEVDNNVHKFVVDDKSHDDSDLIYSKLKEIIHRATLV 490
QGVARMRKLI+++GIKT PGWSWIEV + VH+FVVDDKSH DS IY KL+E+IHRA+LV
Sbjct: 429 QGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLV 488
Query: 491 GYKVEDESLVSGCE--IGEECYSNSGSYHSEKLAIAFGLANTSEGTSLRIVKNLRVCRDC 548
GY +E+ SLV+ E E C+ S SYHSEKLAIA+GLA T EGTSL IVKNLRVCRDC
Sbjct: 489 GYAMEESSLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDC 548
Query: 549 HSFTKYVSKAFDRDIIVRDRVRFHHFKHG 577
H+FTK+VS AFDR+IIVRDRVRFHHFK G
Sbjct: 549 HNFTKFVSMAFDREIIVRDRVRFHHFKGG 577
>XP_002278925.2 PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/569 (68%), Positives = 464/569 (81%), Gaps = 4/569 (0%)
Query: 13 ISLLQGCNNMIKFQKIHAQVILNGYQDDPIISNKLLNLCAVSISGNLEYARFLFSQFKFL 72
+SLLQGCN+M K KIHA +++NGYQ +P IS KLLN CAVS+SG+L YA+ +F +
Sbjct: 27 LSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNP 86
Query: 73 QTSTWNSMIRGYSQSSTPLQ--AVFYYNHMMSQGLSRPDNFTFSFLLKACEKAKAEKKCR 130
QT WNSMIRG+SQS +PLQ A+ +YNHM+S +RPD +TFSFLLKACE+AK E KCR
Sbjct: 87 QTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCR 146
Query: 131 EVHGLITKSGYSNDVVVCTNLVRSYAGNELIGMARLLFDEMPERDLVCWNSMISCYSQAG 190
EVHG I + GY DVV+CTNL+RSYAGN LI A +F+EMP RDLV WNSMISCY Q G
Sbjct: 147 EVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTG 206
Query: 191 LHDEALKVYSRMRNSDVGLDEFTIVSLLSSCTHVGALNFGTQIHKFVDENGFMQNVFVGN 250
LH+EALK+Y +MR S+VG D FT+VSLLSSC HVGAL+ G Q+H+F E ++N+FVGN
Sbjct: 207 LHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGN 266
Query: 251 ALIDMYAKCGSLDMSRWVFDRMRKRDVFSWNSIIIGLGVHGSGDEAIPFFEQMLTARVQP 310
ALIDMYAKCGSL + +F+ M KRDVF+WNS+I+G GVHG GDEAI FF ML A V+P
Sbjct: 267 ALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRP 326
Query: 311 NSITFLGLLCGCSHQGRIDEGIKYFKMMSSEFNIVPGIKHFGCMVDMFGRVGKLEEAMEF 370
NSITFLGLLCGCSHQG + EG++YF MMSSEFN+ PGIKH+GCMVD+FGR GKL+EA+E
Sbjct: 327 NSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEV 386
Query: 371 IDKSPTQEDPILWRTLLGACKIHKNVELGEVAMRHLVNLKALNAGDCVLLAGIYEAARDQ 430
I SP+Q DP+LWRTLLG+CKIH+NVE+GE+AMR+LV L +L AGDCVLL+GIY A+D
Sbjct: 387 IRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDL 446
Query: 431 QGVARMRKLIKTQGIKTVPGWSWIEVDNNVHKFVVDDKSHDDSDLIYSKLKEIIHRATLV 490
QGVARMRKLI+++GIKT PGWSWIEV + VH+FVVDDKSH DS IY KL+E+IHRA+LV
Sbjct: 447 QGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLV 506
Query: 491 GYKVEDESLVSGCE--IGEECYSNSGSYHSEKLAIAFGLANTSEGTSLRIVKNLRVCRDC 548
GY +E+ SLV+ E E C+ S SYHSEKLAIA+GLA T EGTSL IVKNLRVCRDC
Sbjct: 507 GYAMEESSLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDC 566
Query: 549 HSFTKYVSKAFDRDIIVRDRVRFHHFKHG 577
H+FTK+VS AFDR+IIVRDRVRFHHFK G
Sbjct: 567 HNFTKFVSMAFDREIIVRDRVRFHHFKGG 595