BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0470.1
(117 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007023888.1 DNA/RNA polymerases superfamily protein [Theobrom... 103 2e-23
XP_007049449.1 DNA/RNA polymerases superfamily protein [Theobrom... 100 2e-22
XP_007022613.1 Uncharacterized protein TCM_033423 [Theobroma cac... 100 4e-22
>XP_007023888.1 DNA/RNA polymerases superfamily protein [Theobroma cacao]
EOY26510.1 DNA/RNA polymerases superfamily protein
[Theobroma cacao]
Length = 1290
Score = 103 bits (257), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
Query: 1 MRQRTWLELLKDYNFMLQYHPGKANVVTDALSRQPRGIVATLMVDQWKMLEDVATYSIDV 60
+RQR WLEL+KDY+ ++ YHPGKANVVTDALSR+ +ATL + ML ++ + I
Sbjct: 757 LRQRRWLELIKDYDLVIDYHPGKANVVTDALSRKSSSSLATLRSSYFPMLLEMKSLGIQ- 815
Query: 61 VGSGVDSLFLGSMVVRPSLLNRIVDAQIDDEWCRKQVSLMQKTE-TEFSTGQDGGLRL 117
+ +G D L S VVRPSLLN+I + Q D+W +++V +Q E +EF DG L L
Sbjct: 816 LNNGEDGTLLASFVVRPSLLNQIRELQKFDDWLKQEVQKLQDGEASEFRLSDDGTLML 873
>XP_007049449.1 DNA/RNA polymerases superfamily protein [Theobroma cacao]
EOX93606.1 DNA/RNA polymerases superfamily protein
[Theobroma cacao]
Length = 920
Score = 100 bits (249), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
Query: 1 MRQRTWLELLKDYNFMLQYHPGKANVVTDALSRQPRGIVATLMVDQWKMLEDVATYSIDV 60
+RQR WLEL+KDY+ ++ YHPGKANVV DALSR+ +ATL + ML ++ + I
Sbjct: 714 LRQRRWLELIKDYDLVIDYHPGKANVVADALSRKSSLSLATLRSSHFSMLLEMKSLGIQ- 772
Query: 61 VGSGVDSLFLGSMVVRPSLLNRIVDAQIDDEWCRKQVSLMQKTET-EFSTGQDGGLR 116
+ +G D L S VVRPSLLN+I + Q D+W +++V +Q ET EF D +
Sbjct: 773 LNNGEDGTLLASFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGETSEFRLSDDAPYK 829
>XP_007022613.1 Uncharacterized protein TCM_033423 [Theobroma cacao] EOY14138.1
Uncharacterized protein TCM_033423 [Theobroma cacao]
Length = 809
Score = 99.8 bits (247), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Query: 1 MRQRTWLELLKDYNFMLQYHPGKANVVTDALSRQPRGIVATLMVDQWKMLEDVATYSIDV 60
+RQR WLEL+KDY+ ++ YHPGK NVV DALSR+ +ATL + ML ++ + I
Sbjct: 473 LRQRRWLELIKDYDLVIDYHPGKENVVADALSRKSSSSLATLQSSYFSMLLEMKSLGIQ- 531
Query: 61 VGSGVDSLFLGSMVVRPSLLNRIVDAQIDDEWCRKQVSLMQKTE-TEFSTGQDG 113
+ +G D L S VVRPSLLN+I + Q D+W +++V +Q E +EF DG
Sbjct: 532 LNNGEDGTLLASFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGEASEFRLNDDG 585