BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g0900.1
(233 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU51479.1 hypothetical protein TSUD_413680 [Trifolium subterran... 129 1e-30
JAT53351.1 Retrovirus-related Pol polyprotein LINE-1 [Anthurium ... 127 5e-30
AAP54617.2 retrotransposon protein, putative, unclassified [Oryz... 125 1e-29
>GAU51479.1 hypothetical protein TSUD_413680 [Trifolium subterraneum]
Length = 2402
Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 2/225 (0%)
Query: 7 FEVFWTKHSDYSTTLRDNWANSTGAFLEKTSNVKLSIQNWSKRAFGVLKNRLTILRKHLA 66
FE WT ++ + + W N G+ EK + ++ NW ++ FG++ R+ + L
Sbjct: 1367 FEQIWTTDDHHTYIVTEAWQNQQGSIDEKLRHTLNALHNWGRKTFGIIPKRIKETHQDLY 1426
Query: 67 NIQSLNPTD-TTLQIKSNLQEEILHLEEVQKTKAEQRAKSKWAHNGDRNTKAFHLAMSMR 125
N+Q L + TLQIK N ++E+ HL E ++ QR+++ W +GD+NTK FH S R
Sbjct: 1427 NLQQLQTNNHITLQIK-NKEKELDHLLEKEEMWWSQRSRALWLTHGDKNTKFFHQNASQR 1485
Query: 126 KQKNRIHQLKTNSGQVTTNEEEITNELTSFFQNLFQAEQVIDPPLEILSAFEIFSAEALT 185
++KN+I +K Q TN+EEI + FQ LF ++ + + E
Sbjct: 1486 RRKNKIECIKDPMHQTHTNKEEIERIFVTHFQELFTSQTISNAAETAQVVHNKLDQEMHD 1545
Query: 186 HISRVPSGEEIKAVVMEMGSIKSPGPDGLPCFFYQHNWDVIGDKL 230
+++ + EE+ + +M S+ PGPDGLP FY WD++G+ +
Sbjct: 1546 YLAMNFTAEEVYLAIKDMKSLAGPGPDGLPTRFYHTYWDIVGNDI 1590
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 32/198 (16%)
Query: 5 NNFEVFWTKHSDYSTTLRD-NWAN----STGAFL--EKTSNVKLSIQNWSKRAFGVLKNR 57
+N W D S R W N AF+ E +K +++ W++ FG ++ +
Sbjct: 401 DNLSYQWVGDRDISEHFRKKTWENIDIQDKKAFIIKETLKGLKEALKVWNREVFGFMELK 460
Query: 58 LTILRKHLANIQSL-----------NPTDTTLQI--KSNLQEEILHLEEVQKTKAEQRAK 104
+ K L ++ L NP + +Q + N +E +LH Q+++
Sbjct: 461 IDKTMKELNEVEELLATGNIDANLINPKELVMQFWEQLNFKESLLH----------QKSR 510
Query: 105 SKWAHNGDRNTKAFHLAMSMRKQKNRIHQLKTNSGQVTTNEEEITNELTSFFQNLFQAEQ 164
+KWA GD N++ FH ++ R++KN+I LK + G+ EI E+ + F E
Sbjct: 511 TKWAQEGDSNSRYFHASIKSRRRKNQIVTLKKD-GEWIQGVAEIKEEVRDHYSKQFFEEW 569
Query: 165 VIDPPLEILSAFEIFSAE 182
P L+ ++ F SA+
Sbjct: 570 SNRPFLQGIN-FNTLSAD 586
>JAT53351.1 Retrovirus-related Pol polyprotein LINE-1 [Anthurium amnicola]
Length = 1225
Score = 127 bits (319), Expect = 5e-30, Method: Composition-based stats.
Identities = 75/234 (32%), Positives = 125/234 (53%), Gaps = 18/234 (7%)
Query: 7 FEVFWTKHSDYSTTLRDNW-ANSTGA----FLEKTSNVKLSIQNWSKRAFGVLKNRLTIL 61
F WT H D+ +++ W ++STG+ F +K +VK ++++W+K FG + ++
Sbjct: 254 FHCMWTSHPDFLNIIKEAWKSDSTGSPMFTFCQKLKSVKNALRSWNKYGFGDVLANISCA 313
Query: 62 RKHLANIQS------LNPTDTTLQIKSNLQEEILHLEEVQKTKAEQRAKSKWAHNGDRNT 115
+K L +Q LNP + + +++EE + + A Q+AK W GD N+
Sbjct: 314 KKKLVQMQGQLQDDPLNPD--LISNEKSVREEFSRAILAENSLARQKAKQFWLTQGDTNS 371
Query: 116 KAFHLAMSMRKQKNRIHQLKTNSGQVTTNEEEITNELTSFFQNLFQAEQVID--PPLEIL 173
K FH A+ R+ N I + + G + + ++ + SFFQ L +++ID P LEI
Sbjct: 372 KFFHAAIKARRMFNSIRKCRNAQGVILEDITQVKSYTLSFFQQLLNQDRIIDSNPHLEI- 430
Query: 174 SAFEIFSAEALTHISRVPSGEEIKAVVMEMGSIKSPGPDGLPCFFYQHNWDVIG 227
+I E ++R S ++IKAVVM+ +KSPGPDG P F+Q WD++G
Sbjct: 431 --SKILVEEDRNLLNRRYSDDDIKAVVMKSPKMKSPGPDGFPAEFFQFCWDIVG 482
>AAP54617.2 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] EAZ16681.1 hypothetical protein
OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 8/227 (3%)
Query: 7 FEVFWTKHSDYSTTLRDNWANSTGAFL------EKTSNVKLSIQNWSKRAFGVLKNRLTI 60
FE W + DY + ++W S+ + V +S+++WSK +FG ++ ++
Sbjct: 211 FEAAWLRAEDYREVVENSWRISSAGCVGLRGVWSVLQQVAVSLKDWSKASFGSVRRKILK 270
Query: 61 LRKHLANIQSLNPTDTTLQIKSNLQEEILHLEEVQKTKAEQRAKSKWAHNGDRNTKAFHL 120
+ + L +++ D +Q + +++++ L E ++ A QR++ W GDRNT FH
Sbjct: 271 MERKLKSLRQSPVNDVVIQEEKLIEQQLCELFEKEEIMARQRSRVDWLREGDRNTAFFHA 330
Query: 121 AMSMRKQKNRIHQLKTNSGQVTTNEEEITNELTSFFQNLFQAEQVIDPPLEILSAFEIFS 180
S R++ NRI +L + G ++E I F++NLF +E D E+L A
Sbjct: 331 RASARRRTNRIKELVRDDGSRCISQEGIKRMAEVFYENLFSSEPC-DSMEEVLDAIPNKV 389
Query: 181 AEALT-HISRVPSGEEIKAVVMEMGSIKSPGPDGLPCFFYQHNWDVI 226
+ + + + + EEIK + +MGS K+PGPDG P FYQ +W ++
Sbjct: 390 GDFINGELGKQYTNEEIKTALFQMGSTKAPGPDGFPALFYQTHWGIL 436