BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1010.1
(420 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN60947.1 hypothetical protein VITISV_015758 [Vitis vinifera] 344 e-104
CAN71782.1 hypothetical protein VITISV_028677 [Vitis vinifera] 303 1e-88
KYP47392.1 Retrovirus-related Pol polyprotein from transposon TN... 280 2e-83
>CAN60947.1 hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 344 bits (882), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/290 (60%), Positives = 214/290 (73%), Gaps = 7/290 (2%)
Query: 16 LADSGTTNSIFRSKKYFLTLKLCKANAITITGSSSLIDGSGRAIIILPSGTKLTIEDALY 75
D TT++I R K+YFL L L KAN TI+G+++L++GSGRA I LP+GT+ I DALY
Sbjct: 324 FGDCATTHTILRDKRYFLELTLIKANVSTISGTTNLVEGSGRANITLPNGTRFHINDALY 383
Query: 76 SNRSLKNLLSFKDIRRNGYHLVTRDENNKEYLYFTSTGSGQKHDLERLATLSSGLYITRI 135
S++S +NLLSFKDIR NGYH+ T +E+N EYLY TS S QK +E+L SSGLY T I
Sbjct: 384 SSKSRRNLLSFKDIRXNGYHIETMNEDNVEYLYITSIISXQKLIMEKLPAFSSGLYHTTI 443
Query: 136 KTVESYAVINQKFYDLNASARWSHVNLSSTRNNAFARLLAQIIRLRAHFPDFPIKSIRLD 195
K +ESY V+NQKF D W H L N AFARLLAQIIRLRA FPD+PIK+IRLD
Sbjct: 444 KPIESYVVVNQKFNDPKVFVLW-HDRLG---NVAFARLLAQIIRLRAQFPDYPIKTIRLD 499
Query: 196 GAGEFTSKAFDAYCILVGIDVEHHVAYVHTQNGLGESFIKHIQLIARPMLMKTKLPISAW 255
AGEFTS+ F Y + VGI++EH VA+ HTQNGL ESFIK +QLIARP+LMKTKLP SAW
Sbjct: 500 NAGEFTSQTFIDYXMSVGINIEHPVAHTHTQNGLAESFIKRLQLIARPLLMKTKLPTSAW 559
Query: 256 GSAVLHAASLIRLRPTANDQHSPYQLVLGHQPNIAHLPRV--TESYIPTA 303
G A++H A+L+R+RPT ++SP QLVLG QPNI HL R+ Y+P A
Sbjct: 560 GHAIMHXAALVRIRPTTYHEYSPSQLVLGKQPNIXHL-RIFGCAVYVPIA 608
Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 104/195 (53%), Gaps = 37/195 (18%)
Query: 263 ASLIRLRPTANDQHSPYQLVLGHQPNIAHLP-------RVTESYIPTANARARINIP--- 312
+++ L P N Q ++ Q LP +VT+S+IP AN ARI++P
Sbjct: 679 STMTHLDPRTNQCELEVQRIIHLQNLXNQLPDAFIDTKKVTKSHIPAANTPARIDVPVGQ 738
Query: 313 ------------------------KEPEETAIANESSK---IQGEALDEAEIPNNEEISI 345
+ PEE I E+ + I+ EA +EA++P N EIS+
Sbjct: 739 LTNESKIRLKRGRPVGSKDVHIEQEAPEEAHIEQETPEDPHIEREAPEEAQVPENCEISV 798
Query: 346 NYECSKEVWDRNETIIDEVFSFPVATSILKENDDYEPRSIEERRQRPDWSKWKDAIQAEL 405
+Y + E WDRN +I+ +F+F VA+ I++ ++D EPR++EE R R DW KWK+ IQAEL
Sbjct: 799 SYVQTGEKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNVEECRHRNDWPKWKEXIQAEL 858
Query: 406 ESLNKRSFFGPVSHT 420
SL KR FGPV T
Sbjct: 859 NSLTKREVFGPVVQT 873
>CAN71782.1 hypothetical protein VITISV_028677 [Vitis vinifera]
Length = 1383
Score = 303 bits (775), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/333 (48%), Positives = 213/333 (63%), Gaps = 23/333 (6%)
Query: 16 LADSGTTNSIFRSKKYFLTLKLCKANAITITGSSSLIDGSGRAIIILPSGTKLTIEDALY 75
D TT++I R K+YFL L L KAN TI+G+++L++GSGRA I LP+GT+ I D LY
Sbjct: 351 FGDCATTHTILRDKRYFLELTLIKANVSTISGTTNLVEGSGRANITLPNGTRFHINDTLY 410
Query: 76 SNRSLKNLLSFKDIRRNGYHLVTRDENNKEYLYFTSTGSGQKHDLERLATLSSGLYITRI 135
S++S +NLLSFKDIRRNGYH+ T +E+N EYLY TS S QK +E+L+ SSGLY T I
Sbjct: 411 SSKSRRNLLSFKDIRRNGYHIETMNEDNVEYLYITSIISCQKLIMEKLSIFSSGLYHTTI 470
Query: 136 KTVESYAVINQKFYDLNASARWSHVNLSSTRNNAFARLLAQ------------------- 176
K +ESY V+NQKF D W H L ++ R++
Sbjct: 471 KPIESYVVVNQKFNDPKVFVLW-HDRLGHPGSSMMRRIIEHSHGHPLKNQKILSPNEYSC 529
Query: 177 IIRLRAHFPDFPIKSIRLDGAGEFTSKAFDAYCILVGIDVEHHVAYVHTQNGLGESFIKH 236
+ + + +F I IRLD AGEFTS+ F YC+ +GI++EH VA+ HTQNGL ESFIK
Sbjct: 530 VACSQDYKHNFQIIQIRLDNAGEFTSQTFIDYCMSIGINIEHLVAHTHTQNGLAESFIKR 589
Query: 237 IQLIARPMLMKTKLPISAWGSAVLHAASLIRLRPTANDQHSPYQLVLGHQPNIAHLPRV- 295
+QLIARP+LMKTKLP SAWG A++HA +L+R+RPT ++SP QLVLG QPNI+HL R+
Sbjct: 590 LQLIARPLLMKTKLPTSAWGHAIMHATALVRIRPTTYHEYSPSQLVLGKQPNISHL-RIF 648
Query: 296 -TESYIPTANARARINIPKEPEETAIANESSKI 327
Y+P A + P+ E + +S I
Sbjct: 649 GCAVYVPIAPTQRTKTGPQRRLEVYVGFDSPSI 681
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 323 ESSKIQGEALDEAEIPNNEEISINYECSKEVWDRNETIIDEVFSFPVATSILKENDDYEP 382
E + I+ EA +EA++P N EIS++Y + E WDRN +I+ +F+F V + I++ ++D EP
Sbjct: 850 EEAHIEQEAPEEAQVPENCEISVSYVQTGEKWDRNNIVINNIFAFQVTSDIIRNDEDPEP 909
Query: 383 RSIEERRQ----RPDWSKW 397
R++EE + +P KW
Sbjct: 910 RNVEEFQTPEDVKPVGYKW 928
>KYP47392.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 814
Score = 280 bits (717), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 197/312 (63%), Gaps = 43/312 (13%)
Query: 151 LNASARWSHVNLSSTRNNAFARLLAQIIRLRAHFPDFPIKSIRLDGAGEFTSKAFDAYCI 210
++AS RWSHV L STRN AFARLLAQ+IRLRAHFPD+PIK IRLD AGEFTS AF+ YCI
Sbjct: 4 IDASTRWSHVCLLSTRNQAFARLLAQLIRLRAHFPDYPIKKIRLDNAGEFTSHAFNEYCI 63
Query: 211 LVGIDVEHHVAYVHTQNGLGESFIKHIQLIARPMLMKTKLPISAWGSAVLHAASLIRLRP 270
+GID+EH VA+VHTQNGL ESFIK ++LIARP+LM++KLP+S WG A+LHAA LIR+RP
Sbjct: 64 SIGIDIEHPVAHVHTQNGLAESFIKRLKLIARPLLMRSKLPMSTWGHAILHAAILIRIRP 123
Query: 271 TANDQHSPYQLVLGHQPNIAHLPRV--TESYIPTANARARINIPKEPEETAIANESSKI- 327
T+ + SP QLV G QPNI+HL R+ Y+P A + P+ + ES I
Sbjct: 124 TSYHKFSPLQLVFGEQPNISHL-RIFGCAVYVPIAPPQRTKMGPQRRLGIYVGYESPSII 182
Query: 328 ------------------------------QGEALDEAEIPNNEEI---------SINYE 348
+ + L++ IP ++ SINY
Sbjct: 183 KYLEPLTGDLFTARFADCHFNELIFPTLGGEQKQLEKDIIPEETQVPEIIENEEISINYV 242
Query: 349 CSKEVWDRNETIIDEVFSFPVATSILKENDDYEPRSIEERRQRPDWSKWKDAIQAELESL 408
+ W+RN ID+VF++ +A + + + +D EP+SI + RQR DW KWKDAI+AEL+SL
Sbjct: 243 MNGIRWNRNNVNIDDVFAYNIALNEINDIEDQEPKSINDCRQRNDWPKWKDAIEAELDSL 302
Query: 409 NKRSFFGPVSHT 420
KR FGPV T
Sbjct: 303 AKRKVFGPVLRT 314