BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1050.1
(193 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016186119.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 107 2e-23
AAX96704.1 retrotransposon protein, putative, Ty3-gypsy sub-clas... 100 2e-21
AAN05526.1 polyprotein [Oryza sativa Japonica Group] 100 5e-21
>XP_016186119.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107627811
[Arachis ipaensis]
Length = 1448
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 83/147 (56%), Gaps = 28/147 (19%)
Query: 62 RDILDEAHRSKCTVHHGGNKMYRDLKRQYSWSEMKKDLAEHVRKCDVCQMRQ-------- 113
+ IL+EAH SK TVH G NKMY+DLK+ + W MKKD+ V C CQ +
Sbjct: 1174 KAILEEAHNSKYTVHPGSNKMYQDLKQLFWWEGMKKDIGVFVSHCLTCQQVKAEHQRPAG 1233
Query: 114 -----KMLTWR---------DQKRFGTLL------RRFIGSDKLQTAQSRQKSYADKRRK 153
++ W+ + K G L + I ++L AQSRQK+Y D RR+
Sbjct: 1234 LLQQIEIPEWKSPIGWFEVGEVKLLGPNLVQDAVEKVCIIRERLLAAQSRQKAYVDNRRR 1293
Query: 154 DLEFIIGDEVLMRVSPMKGVLSFGKKG 180
+LEF +GD+V +RVSPMKGV+ FGK+G
Sbjct: 1294 NLEFSVGDQVFLRVSPMKGVMRFGKRG 1320
>AAX96704.1 retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] ABA92965.1 retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1212
Score = 100 bits (249), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/125 (45%), Positives = 76/125 (60%), Gaps = 8/125 (6%)
Query: 64 ILDEAHRSKCTVHHGGNKMYRDLKRQYSWSEMKKDLAEHVRKCDVCQ--MRQKMLTWRDQ 121
IL EAH S ++H G KMY+DLK Y W MK+D+AE+V CDVCQ + ++
Sbjct: 969 ILKEAHESAYSLHPGSTKMYQDLKEGYWWPNMKRDVAEYVALCDVCQKVKAEHQRPAGER 1028
Query: 122 KRFGTLL------RRFIGSDKLQTAQSRQKSYADKRRKDLEFIIGDEVLMRVSPMKGVLS 175
FG + + + D+L+ AQSRQKSYAD RR++LEF GD V ++VSPM+G
Sbjct: 1029 AVFGPDIIKEAEEKVHLIQDRLKVAQSRQKSYADTRRRNLEFKEGDYVYLKVSPMRGTKR 1088
Query: 176 FGKKG 180
F KG
Sbjct: 1089 FKVKG 1093
>AAN05526.1 polyprotein [Oryza sativa Japonica Group]
Length = 1471
Score = 99.8 bits (247), Expect = 5e-21, Method: Composition-based stats.
Identities = 54/123 (43%), Positives = 79/123 (64%), Gaps = 12/123 (9%)
Query: 64 ILDEAHRSKCTVHHGGNKMYRDLKRQYSWSEMKKDLAEHVRKCDVCQMRQKMLTWRDQKR 123
IL EAH+++ ++H G KMY+DLK ++ W M++++AE V CDVCQ + + +R
Sbjct: 1254 ILTEAHQTQYSIHPGSTKMYQDLKEKFWWVNMRREIAEFVALCDVCQRVKA-----EHQR 1308
Query: 124 FGTLLR------RFIGSDKLQTAQSRQKSYADKRRKDLEFIIGDEVLMRVSPMKGVLSFG 177
+LR R I ++L+ AQSRQKSYAD RR++L F GD V +RV+P++GV F
Sbjct: 1309 PAEVLREAEEKVRTI-RERLRIAQSRQKSYADNRRRELTFEAGDYVYLRVTPLRGVHRFQ 1367
Query: 178 KKG 180
KG
Sbjct: 1368 TKG 1370