BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1260.1
(220 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013700463.1 PREDICTED: uncharacterized protein LOC106404280 [... 178 2e-52
XP_017609417.1 PREDICTED: uncharacterized protein LOC108455356 [... 177 1e-51
XP_012477568.1 PREDICTED: uncharacterized protein LOC105793188 [... 168 2e-49
>XP_013700463.1 PREDICTED: uncharacterized protein LOC106404280 [Brassica napus]
Length = 262
Score = 178 bits (452), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 138/218 (63%), Gaps = 6/218 (2%)
Query: 6 FHFRSVLDKEKLNEHNFLEWERNLGIVLGMEGKLNVLETPIPILDATSTH--EEKEHEKN 63
F RSVL+K+KLN NFLEW RNL IVL E K VLE +P T+ E ++K+
Sbjct: 8 FSLRSVLEKDKLNGSNFLEWHRNLRIVLKQEKKDYVLENVLPEKSKTNVQHAERNAYDKH 67
Query: 64 VRKRAEPVTCLMLATMEPTLQKQFIDMDV-YSMIRQLREMFQKLSRLERFETSRTLLDTR 122
V R + V CLMLATM LQKQ+ ++D MI L+ MFQ+ +R ER++T ++L++ +
Sbjct: 68 VSDRVD-VCCLMLATMNSDLQKQYENVDSPIDMITSLKGMFQEQARTERYQTVKSLIECK 126
Query: 123 LEKGKPVGPHVRQMIRLIGKLAKLGFPYSQQAATDTILQSLHRGFNQFKMNCNMNGWDKT 182
L PV PHV +M+ I LAKL P SQ+ ATD ILQSL ++QF MN NMN KT
Sbjct: 127 LPIDGPVSPHVIKMMGYIDNLAKLDCPISQELATDLILQSLPSSYDQFVMNYNMNNLTKT 186
Query: 183 LEELHAMLQTAEHDVEILEHKKDVLMIQKDKGFKKGGK 220
L ELH ML+TAE +++ + +VLM+Q FKK GK
Sbjct: 187 LTELHGMLKTAEPNMK--KDTPNVLMVQGGNKFKKQGK 222
>XP_017609417.1 PREDICTED: uncharacterized protein LOC108455356 [Gossypium
arboreum]
Length = 289
Score = 177 bits (448), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 134/210 (63%), Gaps = 2/210 (0%)
Query: 6 FHFRSVLDKEKLNEHNFLEWERNLGIVLGMEGKLNVLETPIPI-LDATSTHEEKEHEKNV 64
RSVL+ +KLN NFL+W RNL IVL E KL V E P+P A ++ +++ K
Sbjct: 8 LSLRSVLENDKLNGLNFLDWFRNLRIVLKQERKLYVNEQPLPNEPPANASRADRDVYKKH 67
Query: 65 RKRAEPVTCLMLATMEPTLQKQFIDMDVYSMIRQLREMFQKLSRLERFETSRTLLDTRLE 124
V CLMLATM P LQKQ DM Y MI L+E++Q +R +RF+ S+ L ++
Sbjct: 68 LNDMVDVRCLMLATMNPELQKQHEDMVAYDMIDHLKELYQGQARQKRFDISKALFQCKMA 127
Query: 125 KGKPVGPHVRQMIRLIGKLAKLGFPYSQQAATDTILQSLHRGFNQFKMNCNMNGWDKTLE 184
+G PVGPHV +MIR I L KLGFP SQ+ ATD ILQSL ++QF +N NMN DKTL
Sbjct: 128 EGSPVGPHVLKMIRYIESLFKLGFPLSQELATDVILQSLPDSYSQFVLNFNMNEIDKTLP 187
Query: 185 ELHAMLQTAEHDVEILEHKKDVLMIQKDKG 214
+L +ML+T E +++ + K +LM++ +KG
Sbjct: 188 QLLSMLRTVEGNMKRV-RPKPILMVRNNKG 216
>XP_012477568.1 PREDICTED: uncharacterized protein LOC105793188 [Gossypium
raimondii]
Length = 203
Score = 168 bits (426), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
Query: 8 FRSVLDKEKLNEHNFLEWERNLGIVLGMEGKLNVLETPIPI-LDATSTHEEKEHEKNVRK 66
RSVL+K+KLN NFL+W RNL IVL E KL V+E P+P A ++ +++ K
Sbjct: 10 LRSVLEKDKLNGLNFLDWFRNLRIVLKQERKLYVIEQPVPNEPPANASRADRDAYKKHLD 69
Query: 67 RAEPVTCLMLATMEPTLQKQFIDMDVYSMIRQLREMFQKLSRLERFETSRTLLDTRLEKG 126
V CLMLATM P LQKQ DM Y MI L+E++Q + ERF+ S+ L +L +G
Sbjct: 70 DMVDVGCLMLATMNPELQKQHEDMVAYEMIEHLKELYQGQAWQERFDISKALFQCKLAEG 129
Query: 127 KPVGPHVRQMIRLIGKLAKLGFPYSQQAATDTILQSLHRGFNQFKMNCNMNGWDKTLEEL 186
PVGPHV +MI I L+KLGF SQ+ AT+ ILQSL ++QF +N NMN DKTL +L
Sbjct: 130 SPVGPHVHKMIGYIESLSKLGFQLSQELATNVILQSLPDSYSQFVLNFNMNEIDKTLPQL 189
Query: 187 HAMLQTAEHDVE 198
+ML+T E +++
Sbjct: 190 LSMLRTTEGNMK 201