BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1280.1
(767 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAT85194.1 putative polyprotein [Oryza sativa Japonica Group] 720 0.0
AAM91886.1 putative polyprotein [Oryza sativa Japonica Group] 706 0.0
ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop... 706 0.0
>AAT85194.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/780 (48%), Positives = 509/780 (65%), Gaps = 48/780 (6%)
Query: 10 QAQGLFVTRGRSNERG-KGKGR-------KSRSKSRGSFKKTCFSCGELGHFKAACPERK 61
QA+GL V RGR E+ K R + RSKSRG +K +C C GH + C K
Sbjct: 105 QAEGL-VVRGRQQEKNTNNKSRDKSSSIYRGRSKSRGRYK-SCKYCKRDGHDISEC--WK 160
Query: 62 LKQKNEGCKE------KQEMQEAGYVSEEAD--ECFSVTEVSEKISDKWMLDSGASHHMC 113
L+ K++ ++ K+E +A V++E E + SD+W+LD+ ++HMC
Sbjct: 161 LQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMC 220
Query: 114 PNREWFTTYRSIDGGTVILGDDSICKTVGLGIIRIKMHDGVVRTLTDVRHIPDLRKNLIS 173
PNR+WF TY ++ GGTV++GDD+ C+ G+G ++IKM DG +RTL DVRHIP+L+++LIS
Sbjct: 221 PNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLIS 280
Query: 174 LGVLERNGCKIIIENGSIKVVKGSLVVMRG-TRYGNLYKLLRTTITGDVAVGISGRDPTA 232
L L+R G K +G +KV KGSLVVM+ +Y NLY L TTI G+VA +
Sbjct: 281 LCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDSLSNSD 340
Query: 233 STRLWHMRLGHMSEKGLSLMCGKGLLKDMKKPCMEFCEHCVFGKAHRVTFSTSKHRSKEV 292
+T LWHMRLGHMSE GL+ + +GLL ++FCEHC+FGK RV F+TS H ++ +
Sbjct: 341 ATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGI 400
Query: 293 LDYVHTDVWGPAKLPSKGGSRYFVTFVDDHSRFVWLYFLKHKNEVFNTFLVWKAMVENKT 352
LDYVH+D+WGPA+ S GG+RY +T VDD+SR VW YFLKHK + F+ F WK MVE +T
Sbjct: 401 LDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 460
Query: 353 GRKLKTLRSVNGTEYTDGAFKEFCNQEGIVRHWTVVNTPQQNGVAERLNRTLLEKARCMR 412
RK+K LR+ NG E FK +C EGIVRH+TV +TPQQNGVAER+NRT++ KARCM
Sbjct: 461 ERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCML 520
Query: 413 SNSGLGVEWWAESVATACYIVNRSPHSSLDDGIPYKVWSGEHADYGRLKVFGCTAYYHVK 472
SN+ L ++WAE+V+TACY++NRSP ++D P +VWSG A+Y L+VFGCTAY HV
Sbjct: 521 SNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVD 580
Query: 473 GNKLDNRAKKAIFLGYATGVKGYRLWCTEDKKFVISRDVVFDESSIVAMAKAT-VPNCGD 531
KL+ R K IFLGY +GVKGY+LWC E KK VISR+VVF ES ++ +T VP
Sbjct: 581 NGKLEPRVIKCIFLGYLSGVKGYKLWCPETKKVVISRNVVFHESIMLHDKPSTNVP---- 636
Query: 532 VGSTKAQVVEVEAEDQRVSRNHDQVEHQDKTQDEEIDEPDHEEVQGEGTQVLQQQQQDVS 591
V S + V+VE +S H + +D I++ D ++ + ++QQ +
Sbjct: 637 VESQEKVSVQVE---HLISSG-----HAPEKEDVAINQ-DAPVIEDSDSSIVQQSPKRSI 687
Query: 592 VHTRPKRLYKPVQRLGSDKPLRHYGQANVVEYALSVEDD-----EPVTFKQAITAAKRES 646
RPKR KP P R+ +AN+V YALSV ++ EP T+ AI +
Sbjct: 688 AKDRPKRNTKP--------PRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNR 739
Query: 647 WSVAMQEEMESLHKNQTWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGTRYKARLVAKGYA 706
W AM +EMESL KN +WE+ LP+ K I CKW++K+KE S RYKARLVAKGY+
Sbjct: 740 WITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYS 799
Query: 707 QKEGVDYNEIFSPVVKHTSIRVLLSIVAHSDLELEQLDVKTAFLHGDLEEEIYMAQPEGY 766
Q G+D+N++FSPVVKH+SIR LLSIVA D ELEQ+DVKTAFLHG+LEE+IYM QPEG+
Sbjct: 800 QIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGF 859
>AAM91886.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/779 (48%), Positives = 503/779 (64%), Gaps = 46/779 (5%)
Query: 10 QAQGLFVTRGRSNERG-KGKGR-------KSRSKSRGSFKKTCFSCGELGHFKAACPERK 61
QA+GL V RGR E+ K + R + RSKSRG +K +C C GH + C + +
Sbjct: 231 QAEGL-VVRGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYK-SCKYCKRDGHDISECWKLQ 288
Query: 62 LKQKNEG-----CKEKQEMQEAGYVSEEAD-ECFSVTEVSEKISDKWMLDSGASHHMCPN 115
K K G K+++E + A E++D E + SD+W+LD+ ++HMCPN
Sbjct: 289 DKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQWILDTAWTYHMCPN 348
Query: 116 REWFTTYRSIDGGTVILGDDSICKTVGLGIIRIKMHDGVVRTLTDVRHIPDLRKNLISLG 175
R+WF TY ++ GGTV++GDD+ C+ G+G ++IKM DG +RTL+DVRHIP+L+++LISL
Sbjct: 349 RDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLC 408
Query: 176 VLERNGCKIIIENGSIKVVKGSLVVMRG-TRYGNLYKLLRTTITGDVAVGISGRDPTAST 234
L+R G K +G +KV KGSLVVM+ + NLY L TTI G+VA + +T
Sbjct: 409 TLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDAT 468
Query: 235 RLWHMRLGHMSEKGLSLMCGKGLLKDMKKPCMEFCEHCVFGKAHRVTFSTSKHRSKEVLD 294
LWHMRLGHMSE GL+ + + LL ++FCEHC+FGK RV F+TS H ++ +LD
Sbjct: 469 NLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILD 528
Query: 295 YVHTDVWGPAKLPSKGGSRYFVTFVDDHSRFVWLYFLKHKNEVFNTFLVWKAMVENKTGR 354
YVH+D+WGPA S GG+RY +T VDD+SR VW YFLKHK + F+ F WK MVE +T +
Sbjct: 529 YVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEK 588
Query: 355 KLKTLRSVNGTEYTDGAFKEFCNQEGIVRHWTVVNTPQQNGVAERLNRTLLEKARCMRSN 414
K+K LR+ NG E+ FK +C EGIV H+TV +TPQQNGVAER+N ++ KARCM SN
Sbjct: 589 KVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSN 648
Query: 415 SGLGVEWWAESVATACYIVNRSPHSSLDDGIPYKVWSGEHADYGRLKVFGCTAYYHVKGN 474
+ L ++WAE+V+T CY++NRSP + D P +VWSG A+Y L+VFGCTAY HV
Sbjct: 649 ADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNG 708
Query: 475 KLDNRAKKAIFLGYATGVKGYRLWCTEDKKFVISRDVVFDESSIVAMAKAT-VPNCGDVG 533
KL+ RA K IFLGY +GVKGY+LWC E KK VISR+VVF ES I+ +T VP V
Sbjct: 709 KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVP----VE 764
Query: 534 STKAQVVEVEAEDQRVSRNH-DQVEHQDKTQDEEIDEPDHEEVQGEGTQVLQQQQQDVSV 592
S + V+VE +S H + E+ QD + ++ + ++QQ +
Sbjct: 765 SQEKASVQVE---HLISSGHAPEKENVAINQDAPV-------IEDSDSSIVQQSSKRSIA 814
Query: 593 HTRPKRLYKPVQRLGSDKPLRHYGQANVVEYALSVEDD-----EPVTFKQAITAAKRESW 647
+PKR KP P R+ +AN+V YALSV ++ EP T+ +AI + W
Sbjct: 815 KDKPKRNIKP--------PRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRW 866
Query: 648 SVAMQEEMESLHKNQTWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGTRYKARLVAKGYAQ 707
AM +EMESL KN TWE V LP+ K I CKW++K+KE S RYKARLVAKGY+Q
Sbjct: 867 ITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQ 926
Query: 708 KEGVDYNEIFSPVVKHTSIRVLLSIVAHSDLELEQLDVKTAFLHGDLEEEIYMAQPEGY 766
G+D+N++FSP++KH+SIR LL IVA D ELEQ+DVKTAFLHG+LEE+IYM QPEG+
Sbjct: 927 IPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGF 985
>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
[Solanum lycopersicum]
Length = 1307
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/772 (47%), Positives = 505/772 (65%), Gaps = 36/772 (4%)
Query: 2 ASGGVDKDQAQGLFVTRGRSNERGKGKGRKSRSKSRGS-FKKTCFSCGELGHFKAACPER 60
A+G Q GLF + + + G G+K++ S+G+ C C E GH+K CP++
Sbjct: 185 ANGTSTDIQPSGLFTSSRKGRKNG---GKKNKPMSKGAKPDDVCNYCKEKGHWKFDCPKK 241
Query: 61 KLKQKNEGCKEKQEMQEAGYVSEEADECFSVTEVSEKISDKWMLDSGASHHMCPNREWFT 120
K + + + + E SEE + V + SD W+LDSGAS+H+CP REWFT
Sbjct: 242 KKQSEKQSVS--AAVAEEDTNSEE--DIALVADEHTHHSDVWVLDSGASYHICPRREWFT 297
Query: 121 TYRSIDGGTVILGDDSICKTVGLGIIRIKMHDGVVRTLTDVRHIPDLRKNLISLGVLERN 180
TY +DGG++ + + S+CK VG G I+I+ HDG TL +VRH+P + KNLISL +L+
Sbjct: 298 TYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDSK 357
Query: 181 GCKIIIENGSIKVVKGSLVVMRGTRYGNLYKLLRTTITGDVAVGISGRDPTASTRLWHMR 240
G ++G ++V KGS ++++G G LY L +T+TG V S T+LWH+R
Sbjct: 358 GFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQKDMTKLWHIR 417
Query: 241 LGHMSEKGLSLMCGKGLLKDMKKPCMEFCEHCVFGKAHRVTFSTSKHRSKEVLDYVHTDV 300
LGHM E+G+ ++ + LL K +EFCEHCVFGK HR F + HR+K LDY+H+D
Sbjct: 418 LGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDC 477
Query: 301 WGPAKLPSKGGSRYFVTFVDDHSRFVWLYFLKHKNEVFNTFLVWKAMVENKTGRKLKTLR 360
WGP ++ S GG R+FV+ +DD+SR W+Y +KHK+E F F WK ++EN+TG+K+K LR
Sbjct: 478 WGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLR 537
Query: 361 SVNGTEYTDGAFKEFCNQEGIVRHWTVVNTPQQNGVAERLNRTLLEKARCMRSNSGLGVE 420
+ NG E+ F +FC EGI RH TV NTPQQNGVAER+N+TLLE+ARCM SN+GL
Sbjct: 538 TDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRR 597
Query: 421 WWAESVATACYIVNRSPHSSLDDGIPYKVWSGEHADYGRLKVFGCTAYYHVKGNKLDNRA 480
+WAE+V+TACY++NR PH+ + P ++WSG+ ADY LK FGCTAYYHV KL+ RA
Sbjct: 598 FWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRA 657
Query: 481 KKAIFLGYATGVKGYRLWCTEDKKFVISRDVVFDESSIV-AMAKATVPNCGDVGSTKAQV 539
KK +F+GY GVKG+R+W +K+ ++SR+VVFDES ++ + K T + + GS QV
Sbjct: 658 KKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTS--ETGSLDKQV 715
Query: 540 VEVEAEDQRVSRNHDQVEHQDKTQDEEIDEPDHEEVQGEGTQVLQQQQQDVSVHTRPKRL 599
+ +V +N ++ ++ E E D E + + Q QD RP+
Sbjct: 716 ------EFQVIQNESDLKEPEEEDQEPQTETDIPESM--PSDIHQSIAQD-----RPR-- 760
Query: 600 YKPVQRLGSDKPLRHYGQANVVEYALSVEDD----EPVTFKQAITAAKRESWSVAMQEEM 655
R+G P R YG ++V YAL V ++ EP T+K+AI ++ E W AM +EM
Sbjct: 761 -----RVGVRPPTR-YGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEM 814
Query: 656 ESLHKNQTWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGTRYKARLVAKGYAQKEGVDYNE 715
ESLHKNQTW++V P G+ +I CKWV+KKKE S +G +YKAR+VA+G+ Q+EGVDYNE
Sbjct: 815 ESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNE 874
Query: 716 IFSPVVKHTSIRVLLSIVAHSDLELEQLDVKTAFLHGDLEEEIYMAQPEGYK 767
IFSPVV+HTSIRVLL+IVAH +LELEQLDVKTAFLHG+LEEEIYM QP+G++
Sbjct: 875 IFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQ 926