BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1530.1
(126 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016481099.1 PREDICTED: uncharacterized protein LOC107802164 [... 56 1e-06
KYP31888.1 Putative ribonuclease H protein At1g65750 family [Caj... 55 1e-06
XP_010068380.1 PREDICTED: uncharacterized protein LOC104455260 [... 55 2e-06
>XP_016481099.1 PREDICTED: uncharacterized protein LOC107802164 [Nicotiana tabacum]
Length = 883
Score = 55.8 bits (133), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 4 WTPPTPRTIKINTDGAYTTTK---GAATVAKNLEGTIIDSL----------GSELQGISL 50
W P +KIN+DG+ K G + +N G +I + E+ S
Sbjct: 664 WDKPPDNWLKINSDGSSNILKRRAGIGGIVRNRNGQLIVTYVQNVQFCTNNSVEVHAASC 723
Query: 51 GHKLPTSLRFEEFIIESDYLSLVDLISGGPQTAPWRLEDEIGKIHGLISAAHTKLHYCHR 110
G KL L F I+E D L +V++I G + PW L D++ + ++ ++ +C+R
Sbjct: 724 GMKLCKDLNFGNIILEMDSLIVVNMIKGKYKV-PWELMDKMETLKDMLQQLQAQVVHCYR 782
Query: 111 VNNSVAHTLA 120
N+VA L+
Sbjct: 783 EGNAVADALS 792
>KYP31888.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 245
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 18/138 (13%)
Query: 4 WTPPTPRTIKINTDGAYTTT---KGAATVAKNLEGTIIDSLGS-----------ELQGIS 49
WT P +KIN DGA T+ A VA++ +G I S S EL+ I
Sbjct: 78 WTAPPENFVKINCDGAMTSNGNKAAAGGVARDFKGEFISSFSSGLKNCSSVTEAELEAIK 137
Query: 50 LGHKLPTSLRFEEFIIESDYLSLVDLISGG-PQTAPWRLEDEIGKIHGLISA-AHTKLHY 107
+G ++ I+ESD + + LI+ G Q+ P+ + IH L H + ++
Sbjct: 138 IGMHTIICRGYKNLIVESDCHAAIQLINRGVDQSHPY--HPHVSSIHQLAKGIKHIQWNH 195
Query: 108 CHRVNNSVAHTLAASNLS 125
R NSVA +LA LS
Sbjct: 196 VFRETNSVADSLAKHGLS 213
>XP_010068380.1 PREDICTED: uncharacterized protein LOC104455260 [Eucalyptus
grandis]
Length = 253
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 17/136 (12%)
Query: 4 WTPPTPRTIKINTDGAYTTT--KGA-ATVAKNLEGTII----------DSLGSELQGI-- 48
W PP P +KIN DGAY T+ +GA A V ++ G +I +L SE+Q +
Sbjct: 85 WHPPDPGALKINIDGAYPTSPQEGAIACVCRDSAGRLITGFTTMITTSSTLQSEIQALVH 144
Query: 49 SLGHKLPTSLRFEEFIIESDYLSLVDLISGGPQTAPWRLEDEIGKIHGLI-SAAHTKLHY 107
+L L L ++ESD LVD + P ++PW+ I + L+ S + +
Sbjct: 145 TLNFLLQKGLDKHHLLLESDCSVLVDAVL-NPLSSPWQHRSLIAEARALLPSFPFLHIRH 203
Query: 108 CHRVNNSVAHTLAASN 123
C R N +A +A S+
Sbjct: 204 CRRAANFIADWVAKSH 219