BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1800.1
(156 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010694928.1 PREDICTED: uncharacterized protein LOC104907668 [... 83 9e-18
XP_010695459.1 PREDICTED: uncharacterized protein LOC104908088 [... 85 9e-18
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass... 80 1e-14
>XP_010694928.1 PREDICTED: uncharacterized protein LOC104907668 [Beta vulgaris
subsp. vulgaris]
Length = 127
Score = 83.2 bits (204), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%)
Query: 58 SRIERFETTGKLLDLRLEEGKLIGPHVSRMIGLFAKLERLGSPLSLSETNDIILHSLHKG 117
+R+ER+ET + L+ ++ GK++GP+V M+GLF +ERLG P + T +I+LH L
Sbjct: 12 ARVERYETNRENLECHVKPGKVVGPNVFAMMGLFENMERLGFPYRVELTTNIVLHPLPDN 71
Query: 118 FNLFRVYYGMNGWIKSLEELHAINASGTRGIYGKS 152
FN FR+ Y MN +L+E+H + + R I +S
Sbjct: 72 FNQFRMTYNMNESKNTLQEMHGLLVNAERNIPKES 106
>XP_010695459.1 PREDICTED: uncharacterized protein LOC104908088 [Beta vulgaris
subsp. vulgaris]
Length = 186
Score = 84.7 bits (208), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 69/119 (57%)
Query: 30 MEVTLHEKPSNMEVQTMCGRAKDLSPKTSRIERFETTGKLLDLRLEEGKLIGPHVSRMIG 89
ME L+++ + T+ + + +++E +ET+ ++L+ ++ G+++GPHV M+G
Sbjct: 1 MESYLYKRFETKDTYTIMQEMRTMFQTQAQVEWYETSREILECHMKPGQVVGPHVFPMMG 60
Query: 90 LFAKLERLGSPLSLSETNDIILHSLHKGFNLFRVYYGMNGWIKSLEELHAINASGTRGI 148
LF +ER G P + DIILHSL FN FR+ + MN K+ +ELH + S R I
Sbjct: 61 LFEIMERFGFPYRVELATDIILHSLPHNFNQFRMTFNMNESEKTFQELHGLLVSAERNI 119
>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%)
Query: 6 TAKDEEHQKDDQKRESINFWMQTAMEVTLHEKPSNMEVQTMCGRAKDLSPKTSRIERFET 65
A+ EH+K I+ M M L + ++ T+ +++ +R ERF T
Sbjct: 126 AAQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNT 185
Query: 66 TGKLLDLRLEEGKLIGPHVSRMIGLFAKLERLGSPLSLSETNDIILHSLHKGFNLFRVYY 125
+ L RL EG L+ PHV +MIG L++LG PLS D+IL SL F F + +
Sbjct: 186 SKSLFACRLAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNF 245
Query: 126 GMNGWIKSLEELHAI 140
MN ++L ELH +
Sbjct: 246 NMNNLNRTLAELHGM 260