BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g1960.1
(204 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN78912.1 hypothetical protein VITISV_004522 [Vitis vinifera] 249 2e-74
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN... 245 7e-72
CAN74178.1 hypothetical protein VITISV_029257 [Vitis vinifera] 224 1e-66
>CAN78912.1 hypothetical protein VITISV_004522 [Vitis vinifera]
Length = 882
Score = 249 bits (637), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 154/210 (73%), Gaps = 7/210 (3%)
Query: 1 MGNLGFSKIVGIGEVKIETSTESTLILKNVRHIPDLRYNLISTGVLDDEGYHSHFGDGKW 60
MGN +K +G+ +V++ETS + LILKNV+HIPD+R NLIS G LDDEG ++ F D +W
Sbjct: 190 MGNDDLAKAIGMRDVRLETSNGTMLILKNVKHIPDIRMNLISIGKLDDEGLYNTFLDSQW 249
Query: 61 KLTKGSMVIARGKKCCSLYRTQVKLCKGELNAVEKDSSTDLWHRRLGHMSEKGLQILAKR 120
KLT+GSMV+A+ KK SLY Q ++ +NAV D + +LWH +L HMSEKGL IL K+
Sbjct: 250 KLTRGSMVVAKRKKYSSLYLMQARVIDSSINAVNDDGTIELWHNKLDHMSEKGLMILVKK 309
Query: 121 QDLPN-------IKDDASRKVWPYAIKTKDQVLAVFKNFHNVVERETGKPLKCIRTDNGG 173
L + IKDD SRK+W Y +KTKDQVL VFK FH +VER++G+ LKCI+TDNGG
Sbjct: 310 NLLSDMKKGSLKIKDDHSRKIWVYTLKTKDQVLKVFKQFHALVERQSGEKLKCIQTDNGG 369
Query: 174 EYIGSFEEYCKTHGIRHEQTVPKTPQQNGV 203
EY G F+EYC+ HGI+H++T KTPQ NG+
Sbjct: 370 EYYGPFDEYCRQHGIQHQKTPLKTPQLNGL 399
>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1314
Score = 245 bits (626), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 159/262 (60%), Gaps = 60/262 (22%)
Query: 1 MGNLGFSKIVGIGEVKIETSTESTLILKNVRHIPDLRYNLISTGVLDDEGYHSHFGDGKW 60
MGN SKIVGIGE+ + T + L+LK VRH+PD+R NLIS LD+ G + F +W
Sbjct: 319 MGNHVTSKIVGIGEIALMTENGNKLMLKEVRHVPDMRLNLISVSKLDEAGMINQFSADRW 378
Query: 61 KLTKGSMVIARGKKCCSLYRTQVKLCKGELNAVEKDSSTDLWHRRLGHMSEKGLQILAKR 120
KL++GSM++ARGKK SLY Q K+CKG++N V +D+S +LWHRRLGHMSEKGL+ILAK
Sbjct: 379 KLSRGSMIVARGKKEGSLYTMQGKICKGDMN-VAQDASKELWHRRLGHMSEKGLEILAKD 437
Query: 121 QDLPNIK-----------------------DDA--------------------------- 130
LPNIK DDA
Sbjct: 438 H-LPNIKGQPLESCEDCLAGKQHRVSFRRPDDARRRKHILDLVHSDVCSTSERSIGGAQY 496
Query: 131 --------SRKVWPYAIKTKDQVLAVFKNFHNVVERETGKPLKCIRTDNGGEYIGSFEEY 182
SRKVW Y +KTKDQVL FK FH +VER TG+ LKCIRTDNGGEY+G FE Y
Sbjct: 497 FVTFIDDHSRKVWVYPLKTKDQVLQAFKEFHALVERATGRKLKCIRTDNGGEYLGPFEYY 556
Query: 183 CKTHGIRHEQTVPKTPQQNGVA 204
CKTHGIRHE+ PKTPQ NGVA
Sbjct: 557 CKTHGIRHEKVPPKTPQMNGVA 578
>CAN74178.1 hypothetical protein VITISV_029257 [Vitis vinifera]
Length = 623
Score = 224 bits (570), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 149/215 (69%), Gaps = 22/215 (10%)
Query: 12 IGEVKIETSTESTLILKNVRHIPDLRYNLISTGVLDDEGYHSHFGDGKWKLTKGSMVIAR 71
+G++++ETS L+LK+VRH+P++ ++LIS G LDDE YHSH G+GKWKLTKGS+V+A
Sbjct: 1 MGDIELETSIRCKLVLKDVRHVPEMSFSLISIGKLDDEVYHSHLGEGKWKLTKGSLVLAX 60
Query: 72 GKKCCSLYRTQVKLCKGELNAVEKDSSTDLWHRRLGHMSEKGLQILAKRQDLP------- 124
GKK +LY+T+ +L K E+N ++ ++ST+L H+ GH SEKGLQ+L ++ LP
Sbjct: 61 GKKNNTLYKTKARLVKREVNIIKNEASTELXHKXFGHXSEKGLQVLXXKKLLPIKVHTDV 120
Query: 125 ---------------NIKDDASRKVWPYAIKTKDQVLAVFKNFHNVVERETGKPLKCIRT 169
D+ R VW YA+K+KDQVL FK+FH VER+TGK LK +R
Sbjct: 121 CTMQSNTLGGALYYVTFIDNHLRNVWSYALKSKDQVLDXFKDFHVKVERQTGKQLKSVRA 180
Query: 170 DNGGEYIGSFEEYCKTHGIRHEQTVPKTPQQNGVA 204
+NGGEY G FE YCK+HGI E+TVPKTPQQNGV
Sbjct: 181 NNGGEYRGLFEXYCKSHGIXLEKTVPKTPQQNGVV 215