BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2310.1
(171 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013722070.1 PREDICTED: uncharacterized protein LOC106425894 [... 83 2e-15
XP_013745364.1 PREDICTED: uncharacterized protein LOC106447969 [... 83 2e-15
XP_009118875.1 PREDICTED: uncharacterized protein LOC103843847 [... 83 2e-15
>XP_013722070.1 PREDICTED: uncharacterized protein LOC106425894 [Brassica napus]
Length = 1194
Score = 82.8 bits (203), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 2 GIVNTFSAHLHTISTSMGSHTSEDFLNLFQPQISEDPNHSLIGIPCCEEIKAATFDLKAD 61
IVN F T+ T+ + E QP IS+ N LI P +EIK A F + +D
Sbjct: 325 AIVNYF----QTLFTTGHGDSREIVEEALQPIISDPENEQLISPPTSQEIKDAVFSIHSD 380
Query: 62 ATPCPDGYPPFFYQANWDTVHRDVTIMVQSFFMTAHLPERANHTTSASSPTPNLRKPRQT 121
P PDG+ F+ +NWD++ +++ +Q+FF T LP R N T P ++ P+
Sbjct: 381 KAPGPDGFSASFFHSNWDSIGKEIVEEIQAFFATGSLPNRVNETF--IRLIPKIQSPKSV 438
Query: 122 LDL--LVCLTLPTKPSPKSWPTDLKLIFPHLSPPFRVAYVSSCQITNNIII 170
D + + K K L+ + P + + A+V+ I++N++I
Sbjct: 439 ADYRPIALCNVYYKIISKLLSKRLQPLLPSIVSENQSAFVAGRAISDNVLI 489
>XP_013745364.1 PREDICTED: uncharacterized protein LOC106447969 [Brassica napus]
Length = 1230
Score = 82.8 bits (203), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 10 HLHTISTSMGSHTSEDFLNLFQPQISEDPNHSLIGIPCCEEIKAATFDLKADATPCPDGY 69
+ H + TS+ QP+I+ D N +LI IP EIK A F + AD P PDG+
Sbjct: 347 YFHNLFTSIDGDRENIVEMALQPRITPDDNAALIKIPSPSEIKDAVFSIHADKAPGPDGF 406
Query: 70 PPFFYQANWDTVHRDVTIMVQSFFMTAHLPERANHTTSASSPTPNLRKPRQTLD 123
F+ +NWD++ D++ +Q+FF T LP + N T P ++ PR D
Sbjct: 407 SASFFHSNWDSIGSDISEEIQTFFTTGSLPPKINETF--IRLIPKIKNPRTVAD 458
>XP_009118875.1 PREDICTED: uncharacterized protein LOC103843847 [Brassica rapa]
Length = 1319
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%)
Query: 10 HLHTISTSMGSHTSEDFLNLFQPQISEDPNHSLIGIPCCEEIKAATFDLKADATPCPDGY 69
+ H + ++ + E ++ P +S + N LI +P EIK A F + AD P PDG+
Sbjct: 368 YFHELFKTIDGNREETVMHALSPMVSAETNEQLIAVPAAVEIKEALFSIHADKAPGPDGF 427
Query: 70 PPFFYQANWDTVHRDVTIMVQSFFMTAHLPERANHT 105
FY NWDTV ++ +Q FF+T LPER N T
Sbjct: 428 SASFYHTNWDTVGPEIVREIQDFFITDRLPERINET 463