BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2390.1
(366 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 381 e-118
BAA22288.1 polyprotein [Oryza australiensis] 376 e-116
CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group] 367 e-116
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 381 bits (978), Expect = e-118, Method: Compositional matrix adjust.
Identities = 178/315 (56%), Positives = 239/315 (75%), Gaps = 2/315 (0%)
Query: 46 GAYVIEVNLADTNDSPSWVFDTGCGAHIISELDGLKGIRYLTKNEMVLRVANKARVAAAA 105
G VI+V LAD++ + SWVFDTG AHI + + L R + + EM LRV NKA+VAA +
Sbjct: 374 GINVIDVLLADSSVN-SWVFDTGSVAHICNSMQSLTKNRRVARGEMDLRVGNKAKVAALS 432
Query: 106 VGTYKLSLETGLILVMHNCYYVPTISRNIISVSVLDKEGYHVIIKNKCCSLYKDEMFYTS 165
T L L +G I+ ++NCYYVP +SRNIIS S L EGY II++ CS++ ++MFY
Sbjct: 433 AETLPLVLPSGFIMELNNCYYVPAMSRNIISASCLMTEGYKFIIEDHGCSIFLNDMFYGY 492
Query: 166 ARLCNGLYVMNIEDE-ILNIDTKRLRTHDSNQGYLWHCRLGHINMKRMQKLHANGLLGSC 224
A + NGL+++N++D I NI+ KRLR ++ N ++WHCRLGHI+ KRM+KLH +G+L S
Sbjct: 493 APVLNGLFILNLDDAPIFNINAKRLRPNNMNSTFIWHCRLGHISEKRMKKLHDDGILNSF 552
Query: 225 DLESYDTCEPCLVGKMTRSSFKGKGDRVSEPLGLIHTNVCRPMSTLARGNYGYFITFTDD 284
DLES++TCE C++GKMT++ F G+ +R S+ L LIHT+VC PMST ARG + YFITFTDD
Sbjct: 553 DLESFETCESCILGKMTKTPFTGRNERASDLLALIHTDVCGPMSTTARGGFQYFITFTDD 612
Query: 285 FTKYGYVYLMKHKSESFELFKQFQNEVENRLGKKKNTIRSYQGGEYLSQEFEDHLRSCGI 344
+++YGY+YLM+HKSESFE FK+FQNEV+N+LGK ++RS +GGE+LSQEF +HL+ CGI
Sbjct: 613 YSRYGYIYLMRHKSESFEKFKEFQNEVQNQLGKTIKSLRSDRGGEFLSQEFGNHLKQCGI 672
Query: 345 VSQLTPPGAPQVNGV 359
V QLTPP PQ NGV
Sbjct: 673 VPQLTPPSTPQWNGV 687
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 376 bits (966), Expect = e-116, Method: Compositional matrix adjust.
Identities = 186/343 (54%), Positives = 241/343 (70%), Gaps = 9/343 (2%)
Query: 19 WEKDLRRVL-DASNKESLIEIPEREEEIGAYVIEVNLADTNDSPSWVFDTGCGAHIISEL 77
W+++ ++ + D K+S G VI++NLA T+ + SWVFDTG AH L
Sbjct: 264 WKRNCKKYMEDLKKKQSTTSAS------GINVIDINLA-TSPTDSWVFDTGSVAHSCKSL 316
Query: 78 DGLKGIRYLTKNEMVLRVANKARVAAAAVGTYKLSLETGLILVMHNCYYVPTISRNIISV 137
G++ R L + E+ LRV N A VA AVGT L L +GL+L ++NCY VPT+ +N+IS
Sbjct: 317 QGMRRSRGLRRGEVNLRVGNGASVATVAVGTVPLHLPSGLVLELNNCYCVPTLCQNVISA 376
Query: 138 SVLDKEGYHVIIKNKCCSLYKDEMFYTSARLCNGLYVMNIE-DEILNIDTKRLRTHDSNQ 196
S L EGY N CS+Y +MFY A L NGLYV+N+E I NI+T+R ++D N
Sbjct: 377 SCLQAEGYDFRSMNNGCSIYLRDMFYFHAPLVNGLYVLNLEASPIYNINTERQLSNDINP 436
Query: 197 GYLWHCRLGHINMKRMQKLHANGLLGSCDLESYDTCEPCLVGKMTRSSFKGKGDRVSEPL 256
++WHCRLGHIN KRM+KLH +GLL S D ES++TCE CL+GKMT++ F G +R S+ L
Sbjct: 437 TFIWHCRLGHINKKRMEKLHKDGLLHSFDFESFETCESCLLGKMTKAPFTGHSERASDLL 496
Query: 257 GLIHTNVCRPMSTLARGNYGYFITFTDDFTKYGYVYLMKHKSESFELFKQFQNEVENRLG 316
L+HT+VC PMS+ ARG Y YFITFTDDF++YGY+YLM+HKSESFE FK+FQNEV+N LG
Sbjct: 497 ALVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIYLMRHKSESFEKFKEFQNEVQNHLG 556
Query: 317 KKKNTIRSYQGGEYLSQEFEDHLRSCGIVSQLTPPGAPQVNGV 359
K +RS +GGEY+SQEF +HL+ CGIV QLTPPG PQ NGV
Sbjct: 557 KTIKFLRSDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGV 599
>CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 367 bits (942), Expect = e-116, Method: Compositional matrix adjust.
Identities = 175/315 (55%), Positives = 229/315 (72%), Gaps = 2/315 (0%)
Query: 46 GAYVIEVNLADTNDSPSWVFDTGCGAHIISELDGLKGIRYLTKNEMVLRVANKARVAAAA 105
G VIE+NLA T+ + SWVFDTG AHI L GLK R L + E+ +RV N ARVA A
Sbjct: 245 GINVIEINLA-TSSTDSWVFDTGLVAHICKSLQGLKRSRSLARGEVDIRVGNGARVAVVA 303
Query: 106 VGTYKLSLETGLILVMHNCYYVPTISRNIISVSVLDKEGYHVIIKNKCCSLYKDEMFYTS 165
VGT LSL +GL+L ++NCY +P + +N+IS S L EGY + CS+Y +++FY +
Sbjct: 304 VGTMSLSLPSGLVLELNNCYCIPALCKNVISASCLQAEGYGFRSVDNGCSVYYNDIFYFN 363
Query: 166 ARLCNGLYVMNIED-EILNIDTKRLRTHDSNQGYLWHCRLGHINMKRMQKLHANGLLGSC 224
A + NGLY++N++ + NI+ KR R +D N ++WHCR GHIN K M+KL+ +GLL S
Sbjct: 364 APMMNGLYIVNLDGCSVYNINAKRQRPNDLNPTFIWHCRFGHINEKCMEKLNRDGLLHSF 423
Query: 225 DLESYDTCEPCLVGKMTRSSFKGKGDRVSEPLGLIHTNVCRPMSTLARGNYGYFITFTDD 284
ES++TCE CL+GKMT++ F G+ +R SE LGL+HT++C PMS+ A+G +GYFITFTDD
Sbjct: 424 GFESFETCESCLLGKMTKAPFTGQSERASELLGLVHTDICGPMSSTAKGGFGYFITFTDD 483
Query: 285 FTKYGYVYLMKHKSESFELFKQFQNEVENRLGKKKNTIRSYQGGEYLSQEFEDHLRSCGI 344
F++YGYVYLM+HKSESFE FK+FQNEV+N LGK +RS GGEYLS EF +HL+ CGI
Sbjct: 484 FSRYGYVYLMRHKSESFEKFKKFQNEVQNHLGKTTKYLRSDCGGEYLSLEFGNHLKKCGI 543
Query: 345 VSQLTPPGAPQVNGV 359
Q TPPG PQ NGV
Sbjct: 544 APQFTPPGTPQWNGV 558