BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2470.1
(439 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZV22485.1 hypothetical protein F511_19705 [Dorcoceras hygrometr... 300 2e-94
ACL97384.1 Gag-Pol polyprotein [Medicago truncatula] 303 1e-88
ACL97386.1 Gag-Pol polyprotein [Medicago truncatula] 302 1e-88
>KZV22485.1 hypothetical protein F511_19705 [Dorcoceras hygrometricum]
Length = 425
Score = 300 bits (767), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 133/194 (68%), Positives = 163/194 (84%)
Query: 1 MTVHRDRKNRKVWITQKSYVEKVLRRFNMENAKPVSTPFPVNYKLSSRQSPSTEAEKAAM 60
M VHRDR NRK+W++Q +Y++K L RFNM+++KP+STP PVN+KLSS PS EAE+ M
Sbjct: 218 MQVHRDRSNRKIWLSQTNYLQKFLHRFNMQDSKPISTPLPVNFKLSSDMCPSNEAERMEM 277
Query: 61 SRVPYSSAVESLMFAMVCTRPDIAQAVGAVSRYMANPGREHWDAVKWILRFLKGTSDCVI 120
SR+PY+SAV SLMFAM+CTRPDIAQAVGAVSRYMANPGREHW VK ILR++KGTS+ +
Sbjct: 278 SRIPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWSTVKRILRYIKGTSNAAL 337
Query: 121 SYGGKNLKLVGFVDADFGGDKDRARSTTGYVFALGGGAISWQSKLQSTVALSTTEAEYMS 180
+GG L L G+VD+D+ GD D+ +STTGYVF L GGA+SW SKLQ+ VALSTTEAEYM+
Sbjct: 338 CFGGSYLTLRGYVDSDYAGDPDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAEYMA 397
Query: 181 ATQACKEAIWLKRL 194
ATQACKE IW++RL
Sbjct: 398 ATQACKETIWIQRL 411
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 88/162 (54%), Gaps = 43/162 (26%)
Query: 193 RLSGRQSPTTTVEKDHMDRIPYASAVGSLMYAMVCTRPDISQAVSVVSRFMANPGKTHWE 252
+LS P+ E+ M RIPYASAVGSLM+AM+CTRPDI+QAV VSR+MANPG+ HW
Sbjct: 261 KLSSDMCPSNEAERMEMSRIPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWS 320
Query: 253 AVKWVLR-------------------------------------------VHGAPVSWRS 269
VK +LR + G VSW S
Sbjct: 321 TVKRILRYIKGTSNAALCFGGSYLTLRGYVDSDYAGDPDKRKSTTGYVFTLAGGAVSWVS 380
Query: 270 MLQSTVALSTMEAEYMAMTKGVKEALWLWGLLDDLGIKQECV 311
LQ+ VALST EAEYMA T+ KE +W+ LL++LG KQ+ V
Sbjct: 381 KLQTVVALSTTEAEYMAATQACKETIWIQRLLEELGHKQDRV 422
>ACL97384.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 303 bits (775), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 133/194 (68%), Positives = 167/194 (86%)
Query: 1 MTVHRDRKNRKVWITQKSYVEKVLRRFNMENAKPVSTPFPVNYKLSSRQSPSTEAEKAAM 60
M +HRDRK+RK+W++QK+Y+ KVLRRFNM++ KP+STP PVN+KLSS SPS EAE+ M
Sbjct: 1024 MQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEM 1083
Query: 61 SRVPYSSAVESLMFAMVCTRPDIAQAVGAVSRYMANPGREHWDAVKWILRFLKGTSDCVI 120
SRVPY+SAV SLM+AM+CTRPDIAQAVG VSR+MA+PG+EHW+AVK I+R++KGTS +
Sbjct: 1084 SRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV 1143
Query: 121 SYGGKNLKLVGFVDADFGGDKDRARSTTGYVFALGGGAISWQSKLQSTVALSTTEAEYMS 180
+GG L + G+VD+DF GD D+ +STTGYVF L GGA+SW SKLQ+ VALSTTEAEYM+
Sbjct: 1144 CFGGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMA 1203
Query: 181 ATQACKEAIWLKRL 194
ATQACKEAIW++RL
Sbjct: 1204 ATQACKEAIWMQRL 1217
Score = 212 bits (539), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 140/223 (62%), Gaps = 43/223 (19%)
Query: 193 RLSGRQSPTTTVEKDHMDRIPYASAVGSLMYAMVCTRPDISQAVSVVSRFMANPGKTHWE 252
+LS SP+ E+ M R+PYASAVGSLMYAM+CTRPDI+QAV VVSRFMA+PGK HW
Sbjct: 1067 KLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWN 1126
Query: 253 AVKWVLR-------------------------------------------VHGAPVSWRS 269
AVK ++R + G VSW S
Sbjct: 1127 AVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLS 1186
Query: 270 MLQSTVALSTMEAEYMAMTKGVKEALWLWGLLDDLGIKQECVDVWCDSQSAIYLAKNQVH 329
LQ+ VALST EAEYMA T+ KEA+W+ L+++LG KQE + V+CDSQSA+++A+N
Sbjct: 1187 KLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARNPAF 1246
Query: 330 HARTKHIDVRYHFVRDVIEEGDVSLMKVHRDENPAEMLTKVVT 372
H+RTKHI V+YHFVR+V+EEG V + K+H ++N A+ +TK +
Sbjct: 1247 HSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADAMTKSIN 1289
>ACL97386.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 302 bits (774), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 133/194 (68%), Positives = 167/194 (86%)
Query: 1 MTVHRDRKNRKVWITQKSYVEKVLRRFNMENAKPVSTPFPVNYKLSSRQSPSTEAEKAAM 60
M +HRDRK+RK+W++QK+Y+ KVLRRFNM++ KP+STP PVN+KLSS SPS EAE+ M
Sbjct: 1024 MQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEM 1083
Query: 61 SRVPYSSAVESLMFAMVCTRPDIAQAVGAVSRYMANPGREHWDAVKWILRFLKGTSDCVI 120
SRVPY+SAV SLM+AM+CTRPDIAQAVG VSR+MA+PG+EHW+AVK I+R++KGTS +
Sbjct: 1084 SRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAV 1143
Query: 121 SYGGKNLKLVGFVDADFGGDKDRARSTTGYVFALGGGAISWQSKLQSTVALSTTEAEYMS 180
+GG L + G+VD+DF GD D+ +STTGYVF L GGA+SW SKLQ+ VALSTTEAEYM+
Sbjct: 1144 CFGGSELTVWGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMA 1203
Query: 181 ATQACKEAIWLKRL 194
ATQACKEAIW++RL
Sbjct: 1204 ATQACKEAIWMQRL 1217
Score = 212 bits (540), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 141/223 (63%), Gaps = 43/223 (19%)
Query: 193 RLSGRQSPTTTVEKDHMDRIPYASAVGSLMYAMVCTRPDISQAVSVVSRFMANPGKTHWE 252
+LS SP+ E+ M R+PYASAVGSLMYAM+CTRPDI+QAV VVSRFMA+PGK HW
Sbjct: 1067 KLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWN 1126
Query: 253 AVKWVLR-------------------------------------------VHGAPVSWRS 269
AVK ++R + G VSW S
Sbjct: 1127 AVKRIMRYIKGTSGVAVCFGGSELTVWGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLS 1186
Query: 270 MLQSTVALSTMEAEYMAMTKGVKEALWLWGLLDDLGIKQECVDVWCDSQSAIYLAKNQVH 329
LQ+ VALST EAEYMA T+ KEA+W+ L+++LG KQE + V+CDSQSA+++A+N
Sbjct: 1187 KLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSALHIARNPAF 1246
Query: 330 HARTKHIDVRYHFVRDVIEEGDVSLMKVHRDENPAEMLTKVVT 372
H+RTKHI V+YHFVR+V+EEG V + K+H ++N A+++TK +
Sbjct: 1247 HSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKPIN 1289