BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2490.1
(340 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KHN13665.1 Retrovirus-related Pol polyprotein from transposon TN... 229 1e-69
XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cac... 217 1e-65
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 221 4e-63
>KHN13665.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 229 bits (584), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/321 (41%), Positives = 201/321 (62%), Gaps = 19/321 (5%)
Query: 12 KYEIEKFNGKNDFSYWRMQMKNLLISQKLHKTLTG--KKPGDMSDEDWEELDLEARATIM 69
++++EKF G+NDFS R++M+ LL+ Q L L G K P +SD++ ++L +A +TI+
Sbjct: 4 RFDVEKFTGENDFSLRRIKMQALLVHQGLDDALQGASKLPSTLSDKEKKDLLSKAHSTII 63
Query: 70 LCLERDVTFLVDGEATAASVWLKLESNFMTKTLTNQVYLKSKLFTCKMEEGSSIQDYVNR 129
L L +V V E +AA +WLKLES +MTK+LTN++YLK +L KMEEGSSI+++V+
Sbjct: 64 LSLGDEVLREVAEEKSAAGIWLKLESLYMTKSLTNKLYLKKRLHQLKMEEGSSIKEHVSL 123
Query: 130 FDRIISDLKDIDVKVEDGDQALILLLSLPKSYENLVQTLMFVGDSLTMEETRNSLLADDL 189
F + + DLK +DV++++ DQA++LL SLP S+ENLV T++F D+LT+EE + +L + +L
Sbjct: 124 FTKAVLDLKSVDVRIDEEDQAVMLLCSLPSSFENLVDTMLFGRDTLTLEEVKATLNSREL 183
Query: 190 RKVATSAMTSGGIDKDQAQGLFVTRRRSNERGKGKGGKSISKSRGSFK--KTCFSCSEFG 247
+K T GG D + + R R +R KS +K R +K K C+ C + G
Sbjct: 184 KKKITENKGEGG-DPEA----LMARGRLEKR----DSKSKNKRRSKYKNEKACYYCKKEG 234
Query: 248 HFKAACPKRKLKQKNEGYKGKHKMQEARYVSEDLDECFSVIEVSEKIF-DKWMLDSGASH 306
HF+ CP+RK K GK+ + V D E V+ +S K ++W+LDSG S
Sbjct: 235 HFRKECPERKKKN-----NGKYNDESDIAVVADGYESAEVLSISTKKHSEEWILDSGCSF 289
Query: 307 HMCPKREWFTTYRSIDGGTFV 327
HM P EWF++Y+ IDGG +
Sbjct: 290 HMTPNLEWFSSYKEIDGGKVL 310
>XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cacao] EOY09126.1
Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 217 bits (552), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/255 (46%), Positives = 172/255 (67%), Gaps = 14/255 (5%)
Query: 10 SGKYEIEKFNGKNDFSYWRMQMKNLLISQKLHKTLTGKK--PGDMSDEDWEELDLEARAT 67
S KYEIEKFNG+NDFS WR++M LL+ Q L K L GK+ P ++SD + ++L +A +
Sbjct: 5 STKYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHSA 64
Query: 68 IMLCLERDVTFLVDGEATAASVWLKLESNFMTKTLTNQVYLKSKLFTCKMEEGSSIQDYV 127
I+L L +V V E +AA++W KLES ++TK+LTN++Y+K +L+T KM EG+S+ ++
Sbjct: 65 ILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHI 124
Query: 128 NRFDRIISDLKDIDVKVEDGDQALILLLSLPKSYENLVQTLMFVGDSLTMEETRNSLLAD 187
+ F+R+I DLK+IDVK+ED D ALILL LP SYEN V T+++ D+LT E+ R L +
Sbjct: 125 DEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRAYLNSK 184
Query: 188 DLRKVATSAMTSGGI-DKDQAQGLFVTRRRSNERGKGKGGKSISKSRGSFKKTCFSCSEF 246
+L+K GGI +++QA+GL V R R E+G K GKS +K KTC++C +
Sbjct: 185 ELKKKV------GGIRNENQAEGLVVNRGRGKEKGLDKKGKSRAKG-----KTCWNCGQK 233
Query: 247 GHFKAACPKRKLKQK 261
GHF+ C K K +K
Sbjct: 234 GHFRQDCTKFKDDEK 248
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 221 bits (564), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 202/320 (63%), Gaps = 13/320 (4%)
Query: 12 KYEIEKFNGKNDFSYWRMQMKNLLISQKLHKTLTGK--KPGDMSDEDWEELDLEARATIM 69
K++IEKF+GK FS W++QMK +L L K L GK KP +M+DE W+ELD +A + I
Sbjct: 6 KFDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSAIQ 65
Query: 70 LCLERDVTFLVDGEATAASVWLKLESNFMTKTLTNQVYLKSKLFTCKMEEGSSIQDYVNR 129
LCL ++V V E TAA++WLKLES +MTK+L N++ LK +L+T +M EG+ IQ ++N
Sbjct: 66 LCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHLNE 125
Query: 130 FDRIISDLKDIDVKVEDGDQALILLLSLPKSYENLVQTLMFV-GDSLTMEETRNSLLADD 188
F+ II DL++I++K++D D+A++L++SLP +Y++ + +++ D+L+ E+ +++LL+ +
Sbjct: 126 FNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLYSNNDTLSFEDVKSNLLSKE 185
Query: 189 LRKVATSAMTSGGIDKDQAQGLFVTRRRSNERGKGKGGKSISKSRG-SFKKTCFSCSEFG 247
+ + +D+ +GL V R R+ E+G KS SKSRG KTC C +FG
Sbjct: 186 KFDLDIHS-------EDKGEGLSV-RGRTQEKGSTSNKKSRSKSRGRKSNKTCRYCKKFG 237
Query: 248 HFKAACPKRKLKQKNEGYKGKHKMQEARYVSEDLDECFSVIEVSEKIFDKWMLDSGASHH 307
H + C K KQ+ + KGK+ + A ++ + + ++ +W+LDSG + H
Sbjct: 238 HDISDCFILKKKQERQ-EKGKNPAEAANVETDSDGDVMISVSSDKRSKTEWILDSGCTFH 296
Query: 308 MCPKREWFTTYRSIDGGTFV 327
MCP ++ FTT +D G +
Sbjct: 297 MCPYKDLFTTLEPVDSGVVL 316