BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2740.1
(178 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016704247.1 PREDICTED: uncharacterized protein LOC107919265 [... 174 6e-50
XP_010667308.1 PREDICTED: uncharacterized protein LOC104884364 [... 178 8e-49
AFP55574.1 non-ltr retroelement reverse transcriptase [Rosa rugosa] 177 3e-48
>XP_016704247.1 PREDICTED: uncharacterized protein LOC107919265 [Gossypium
hirsutum]
Length = 396
Score = 174 bits (441), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 116/176 (65%), Gaps = 1/176 (0%)
Query: 1 MGQEIIHSFKQMK-GATGFFGLKLDMSKAYDRIEWSFLNDIMRKLGFSDHWINMIHNCIS 59
+ EI+H+F+Q + G G+ +KLDMSKAYDR+EWSFL ++M ++GF+ W+++I CI+
Sbjct: 199 LAYEILHTFQQKQTGNKGYMAVKLDMSKAYDRVEWSFLKEVMLRMGFAKEWVDLIMKCIN 258
Query: 60 SSSMSVLINGNPGPIFYPSRGIRQGDPLSPFLFTLAMEGLSRILVSNPDEGKFLGFPTNN 119
++ +V NG G IF SRG+ QGDPLSPFLF L EGLS ++ EG G +
Sbjct: 259 LATYAVNTNGRRGRIFKSSRGLLQGDPLSPFLFLLYSEGLSTLMRLAMKEGLLKGAKASR 318
Query: 120 PNLTISHLLFADDCIIFGKNSIDNVHNLKTMLNLFCSASGQTINYNKSNIFYSKNS 175
IS LLFADDCI+FG+ + V LK +L F SGQ +N++KS +F+S N+
Sbjct: 319 KGPEISQLLFADDCILFGEATDSGVRMLKGILKEFEECSGQCVNFDKSTVFFSTNT 374
>XP_010667308.1 PREDICTED: uncharacterized protein LOC104884364 [Beta vulgaris
subsp. vulgaris]
Length = 1286
Score = 178 bits (452), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 117/176 (66%), Gaps = 1/176 (0%)
Query: 1 MGQEIIHSFKQMKGATGFFGLKLDMSKAYDRIEWSFLNDIMRKLGFSDHWINMIHNCISS 60
+ E+ HSF++ G++G+ +KLDM KAYDR+EW+F+ + +KLGF D WI+ + CIS+
Sbjct: 464 LAHEVFHSFRKKSGSSGWLAIKLDMEKAYDRLEWNFIFAVFKKLGFCDRWIDWLKECIST 523
Query: 61 SSMSVLINGNPGPIFYPSRGIRQGDPLSPFLFTLAMEGLSRILVSNPDEG-KFLGFPTNN 119
S SVL+NG PG IF PSRGIRQGDPLSP++F L E L+R L EG + +G +
Sbjct: 524 VSFSVLVNGIPGDIFTPSRGIRQGDPLSPYIFILCAELLARQLFCASTEGSRLVGVKLGH 583
Query: 120 PNLTISHLLFADDCIIFGKNSIDNVHNLKTMLNLFCSASGQTINYNKSNIFYSKNS 175
+ I L FADD +IF K S+++ ++ +L+ +C SGQ +NYNKS S N+
Sbjct: 584 SGVKIPFLTFADDIMIFAKASVESCREIRGILDTYCRMSGQLVNYNKSAYQCSPNT 639
>AFP55574.1 non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 177 bits (448), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 116/176 (65%), Gaps = 1/176 (0%)
Query: 1 MGQEIIHSFKQMKGAT-GFFGLKLDMSKAYDRIEWSFLNDIMRKLGFSDHWINMIHNCIS 59
+ EI H K + G FGLKLDM+KAYDR+EW+FL ++RK+GF D WI ++ +C++
Sbjct: 1161 IAHEIYHHLKLTRSCNNGAFGLKLDMNKAYDRVEWNFLEAVLRKMGFVDSWIGLVMSCVT 1220
Query: 60 SSSMSVLINGNPGPIFYPSRGIRQGDPLSPFLFTLAMEGLSRILVSNPDEGKFLGFPTNN 119
+SS+SVLING PGP F PSRG+RQGDPLSPFLF + LSR++ +
Sbjct: 1221 TSSLSVLINGKPGPSFLPSRGLRQGDPLSPFLFLFVNDVLSRMINKMCQDSLLTPVTIGP 1280
Query: 120 PNLTISHLLFADDCIIFGKNSIDNVHNLKTMLNLFCSASGQTINYNKSNIFYSKNS 175
NL +SHL FADD + F + ++ N L +L+ +C ASGQ IN KS+IF+S N+
Sbjct: 1281 NNLPVSHLFFADDSLFFLRATLQNCETLSDLLHTYCIASGQLINVEKSSIFFSPNT 1336