BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2790.1
(200 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006581152.1 PREDICTED: E3 ubiquitin-protein ligase ATL23-like... 66 9e-11
XP_003603815.1 zinc finger, C3HC4 type (RING finger) protein [Me... 66 1e-10
BAK01001.1 predicted protein [Hordeum vulgare subsp. vulgare] 66 1e-10
>XP_006581152.1 PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Glycine max]
KHN09061.1 E3 ubiquitin-protein ligase ATL23-like
protein [Glycine soja] KRH51664.1 hypothetical protein
GLYMA_06G021400 [Glycine max]
Length = 130
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 108 IDQAQLEPITD-----LELERFLKKIIIDETAEETTCSVCIQDLNDQDDARAPIGCNHIF 162
ID ++P+TD LELE+ L KI E T C+VC+ ++ + AR GCNH F
Sbjct: 39 IDGQPVKPVTDKGLSALELEK-LPKITGKELVLGTECAVCLDEIESEQPARVVPGCNHGF 97
Query: 163 HYNCISTWLKANPTCPMCR 181
H C TWL +P CP+CR
Sbjct: 98 HVQCADTWLSKHPICPVCR 116
>XP_003603815.1 zinc finger, C3HC4 type (RING finger) protein [Medicago truncatula]
AES74066.1 zinc finger, C3HC4 type (RING finger) protein
[Medicago truncatula] AFK42286.1 unknown [Medicago
truncatula]
Length = 127
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 113 LEPITD-----LELERFLKKIIIDETAEETTCSVCIQDLNDQDDARAPIGCNHIFHYNCI 167
L+P+T+ L+LE+ L KI E T C+VC+ D+ D+ AR GCNH FH C
Sbjct: 41 LKPVTEKGLSPLDLEK-LPKITGKELLAPTECAVCLDDIVDEQPARLLPGCNHAFHLQCA 99
Query: 168 STWLKANPTCPMCR 181
TWL +P CP+CR
Sbjct: 100 DTWLSKHPMCPLCR 113
>BAK01001.1 predicted protein [Hordeum vulgare subsp. vulgare]
Length = 141
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 130 IDETAEETTCSVCIQDLNDQDDARAPIGCNHIFHYNCISTWLKANPTCPMCRKD 183
+DE E CSVC+QDL + AR GC H+FH CI WL + +CP+CR+D
Sbjct: 87 VDEAGEALCCSVCLQDLEVGESARRLPGCRHVFHAPCIDRWLVRHASCPLCRRD 140