BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2880.1
(136 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAA58957.1 photosystem I subunit (chloroplast) [Antirrhinum majus] 176 2e-54
ABK55706.1 chloroplast photosystem I P700 apoprotein A2, partial... 175 4e-54
KYP77018.1 Photosystem I P700 chlorophyll a apoprotein A2 [Cajan... 174 1e-53
>CAA58957.1 photosystem I subunit (chloroplast) [Antirrhinum majus]
Length = 135
Score = 176 bits (445), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 81/92 (88%), Positives = 87/92 (94%)
Query: 22 SHDDISEECLYQNIFASHFGQLAIIFLWTSRNLFHVAWEGNFESWVNEPLHIRHVAHAIW 81
SHDDI+EE LYQNIFASHFGQLAIIFLWTS NLFHVAW+GNFESWV +PLH+R +AHAIW
Sbjct: 33 SHDDITEERLYQNIFASHFGQLAIIFLWTSGNLFHVAWQGNFESWVQDPLHVRPIAHAIW 92
Query: 82 DPHFGQPPVEAFTRGGALGPVNVAYSGVYQWW 113
DPHFGQP VEAFTRGGALGPVN+AYSGVYQWW
Sbjct: 93 DPHFGQPAVEAFTRGGALGPVNIAYSGVYQWW 124
>ABK55706.1 chloroplast photosystem I P700 apoprotein A2, partial [Cucumis
sativus]
Length = 155
Score = 175 bits (444), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 80/92 (86%), Positives = 87/92 (94%)
Query: 22 SHDDISEECLYQNIFASHFGQLAIIFLWTSRNLFHVAWEGNFESWVNEPLHIRHVAHAIW 81
SHDDI+EE LYQNIFASHFGQLAIIFLWTS NLFHVAW+GNFE+WV +PLH+R +AHAIW
Sbjct: 33 SHDDITEERLYQNIFASHFGQLAIIFLWTSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIW 92
Query: 82 DPHFGQPPVEAFTRGGALGPVNVAYSGVYQWW 113
DPHFGQP VEAFTRGGALGPVN+AYSGVYQWW
Sbjct: 93 DPHFGQPAVEAFTRGGALGPVNIAYSGVYQWW 124
>KYP77018.1 Photosystem I P700 chlorophyll a apoprotein A2 [Cajanus cajan]
Length = 157
Score = 174 bits (441), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 88/92 (95%)
Query: 22 SHDDISEECLYQNIFASHFGQLAIIFLWTSRNLFHVAWEGNFESWVNEPLHIRHVAHAIW 81
SHDDI+EE LYQNIFASHFGQLA+IFLWTS+NLFHVAW+GNFE+WV +PLH+R +AHAIW
Sbjct: 33 SHDDITEERLYQNIFASHFGQLAMIFLWTSKNLFHVAWQGNFEAWVQDPLHVRPIAHAIW 92
Query: 82 DPHFGQPPVEAFTRGGALGPVNVAYSGVYQWW 113
+PHFGQP +EAFTRGGALGPVN+AYSGVYQWW
Sbjct: 93 NPHFGQPAIEAFTRGGALGPVNIAYSGVYQWW 124