BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g2920.1
(124 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterran... 64 2e-09
AAX92970.1 retrotransposon protein, putative, unclassified [Oryz... 63 4e-09
EEC68026.1 hypothetical protein OsI_35837 [Oryza sativa Indica G... 62 1e-08
>GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterraneum]
Length = 1250
Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 43 TTTCKWAVPPEGHILINTDGAFDANSG--GYGAILRNDRGDVIVAAAARTQRCSVITHEL 100
+++ +W PPE I +N DGA +G G G +LRN G +VA +AR SV+ EL
Sbjct: 1079 SSSIRWERPPENFIALNCDGAVTGLTGLAGCGGVLRNCHGGFLVAFSARAGSVSVVHAEL 1138
Query: 101 QGIRLGLQLANKFGKRQVRIATDS 124
GI GL+LA G +++R+ +DS
Sbjct: 1139 WGIINGLELAKNKGLKRIRVESDS 1162
>AAX92970.1 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] AAX96036.1 retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
ABA92841.1 retrotransposon protein, putative,
unclassified [Oryza sativa Japonica Group]
Length = 796
Score = 62.8 bits (151), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 16/125 (12%)
Query: 9 KIKVLAWKHRPIGINGTQQILERWNLVIPLNLKATTTCK------WAVPPEGHILINTDG 62
K+K+ AWK + + +R NL+A+ CK W P G + +N DG
Sbjct: 597 KVKIHAWKAASNTLPTMENKKKR-------NLEASEICKIQPPVPWTKPQLGWMKLNIDG 649
Query: 63 AFDA--NSGGYGAILRNDRGDVIVAAAARTQRC-SVITHELQGIRLGLQLANKFGKRQVR 119
+FDA N GG GAILRN+ G VI +A +RC S + EL + G+ +A ++ +
Sbjct: 650 SFDASLNQGGIGAILRNNAGSVIFSACGFIERCSSALEAELLACKEGIIMALQWTLLPIC 709
Query: 120 IATDS 124
I TDS
Sbjct: 710 IETDS 714
>EEC68026.1 hypothetical protein OsI_35837 [Oryza sativa Indica Group]
Length = 819
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 9 KIKVLAWKHRPIGINGTQQILERWNLVIPLNLKATTTCK------WAVPPEGHILINTDG 62
K+K+ AWK + + +R NL+A+ CK W P G + +N DG
Sbjct: 620 KVKIHAWKAASNSLPTMENKKKR-------NLEASEICKIQPPVPWTKPQLGWMKLNIDG 672
Query: 63 AFDA--NSGGYGAILRNDRGDVIVAAAARTQRC-SVITHELQGIRLGLQLANKFGKRQVR 119
+FDA N GG GAILRN+ G VI +A +RC S + EL + G+ +A ++ +
Sbjct: 673 SFDASLNQGGIGAILRNNAGSVIFSACGFIERCRSALEAELLACKEGIIMALQWTLLPIC 732
Query: 120 IATD 123
I TD
Sbjct: 733 IETD 736