BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3260.1
(676 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAD17357.1 contains similarity to retrovirus-related polyprotein... 184 9e-46
XP_010556061.1 PREDICTED: uncharacterized protein LOC104825432 [... 163 1e-43
CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group] 178 2e-43
>AAD17357.1 contains similarity to retrovirus-related polyproteins [Arabidopsis
thaliana] CAB77943.1 putative transposon protein
[Arabidopsis thaliana]
Length = 769
Score = 184 bits (466), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 140/242 (57%), Gaps = 36/242 (14%)
Query: 322 ELQLIQKNKGKKEGTHGSDQGIYVIEVNLENTFDSQSWVFDTGCGAHISSDVQGLKGIKY 381
L+ ++KNK K S GIYVIEVN+ T W DTGCGAHI ++ G+
Sbjct: 27 HLENLEKNKTFKI----SSSGIYVIEVNV-TTSGFTPWELDTGCGAHICVNMHGINNSIT 81
Query: 382 LSARELVLRVENKATVVAKAVGTFSLPLETGLVLELHNCYYVPSISRNIISVSESSFKG- 440
+ ++ LR+ N A V VGT+SL +G+VLEL NCYYV +I++NIISVS +G
Sbjct: 82 MEEGQVDLRMANGARVSTLVVGTYSLSFPSGMVLELKNCYYVHAINKNIISVSCLDMEGF 141
Query: 441 ---------KGDR-----AKEPLE--LIHIDVCGLMSTP----------TRGNYGYFITF 474
DR PLE L ++ S P RGNY YFITF
Sbjct: 142 HFLIKNKCCSFDRNDMFYGSAPLENELYVLN----QSMPIYNIRTKRFNARGNYQYFITF 197
Query: 475 TDDFTRYGYIYLMRHKSELFDMFKQFQCEVEDQLGKKIKVIRSDRGGEYLSQEFDDHLRS 534
TDDF RYGY+YLM+HK E F+ K+FQ EV+++LGK IK +RSDRGGEYLSQ F DHLR
Sbjct: 198 TDDFNRYGYVYLMKHKLESFEKSKEFQNEVKNKLGKSIKALRSDRGGEYLSQVFSDHLRE 257
Query: 535 YG 536
G
Sbjct: 258 CG 259
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%)
Query: 532 LRSYGCEVYVKRLQGDKIAPKSDKCLFVSYSKETRGYYFYLESENKVFVARDGVFLEKEF 591
L+ GCE YVKRL DK+ PKSDKC FV Y KET+GYYFY ++NKVFVAR+G F ++ F
Sbjct: 338 LKILGCEAYVKRLITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFVARNGAFWKESF 397
>XP_010556061.1 PREDICTED: uncharacterized protein LOC104825432 [Tarenaya
hassleriana]
Length = 165
Score = 163 bits (413), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 106/168 (63%), Gaps = 21/168 (12%)
Query: 433 VSESSFKGKGDRAKEPLELIHIDVCGLMSTPTRGNYGYFITFTDDFTRYGYIYLMRHKSE 492
+++S F GKG RA E L LIH DVCG M+TP RG Y YF+TFTDD++RYGY+YLMR S+
Sbjct: 1 MTKSPFTGKGQRADELLSLIHSDVCGPMNTPARGGYSYFVTFTDDYSRYGYVYLMRSPSK 60
Query: 493 LFDMFKQFQCEVEDQLGKKIKVIRSDRGGEYLSQEFDDHLRSYGCEVYVKRLQGDKIAPK 552
+ E +GK +K+ +LR +GC++YVKR DK+ PK
Sbjct: 61 SVQ-----KTSYELWVGKSLKM---------------SYLRIWGCDIYVKRQLSDKLGPK 100
Query: 553 SDKCLFVSYSKETRGYYFYLESENKVFVARDGVFL-EKEFPFKQTSGR 599
S++CLFV Y KETRGYYFY +ENKVFVARD FL E FP K R
Sbjct: 101 SERCLFVGYPKETRGYYFYNPTENKVFVARDRTFLNENSFPRKLVGVR 148
>CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 122/178 (68%), Gaps = 7/178 (3%)
Query: 433 VSESSFKGKGDRAKEPLELIHIDVCGLMSTPTRGNYGYFITFTDDFTRYGYIYLMRHKSE 492
++++ F G+ +RA E L L+H D+CG MS+ +G +GYFITFTDDF+RYGY+YLMRHKSE
Sbjct: 439 MTKAPFTGQSERASELLGLVHTDICGPMSSTAKGGFGYFITFTDDFSRYGYVYLMRHKSE 498
Query: 493 LFDMFKQFQCEVEDQLGKKIKVIRSDRGGEYLSQEFDDHLRSYGCEVYVK---RLQGDKI 549
F+ FK+FQ EV++ LGK K +RSD GGEYLS EF +HL+ G Q + +
Sbjct: 499 SFEKFKKFQNEVQNHLGKTTKYLRSDCGGEYLSLEFGNHLKKCGIAPQFTPPGTPQWNGV 558
Query: 550 APKSDKCLFVSYSKETRGYYFYLESENKVFVARDGVFLEKEFPFKQTSGRNVDIDEIR 607
+ + ++ L ET+GYYFY E E KVFV R GVFLEKEF ++ SG V ++EI+
Sbjct: 559 SERRNRTLL---DMETKGYYFYQE-EGKVFVVRHGVFLEKEFISRKDSGSMVRLEEIQ 612
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 255 SIRMKSVSVTCLMLATMEPNLQKRFRKMDAHTIIRRLRDMSRNKSRLRKYGTSKAIRSG- 313
+ MK+++ T + L M ++ +K H ++ R + KS ++ S I S
Sbjct: 144 NFNMKNLNRTLIELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTR 203
Query: 314 -----IGMSESNKELQLIQKN--------KGKKEGTHGSDQGIYVIEVNLENTFDSQSWV 360
+ + KE ++N K K++ S GI VIE+NL T + SWV
Sbjct: 204 NSKTKVQKTGPAKETGHWKRNCKKYLEQLKQKQQNGKSSTSGINVIEINLA-TSSTDSWV 262
Query: 361 FDTGCGAHISSDVQGLKGIKYLSARELVLRVENKATVVAKAVGTFSLPLETGLVLELHNC 420
FDTG AHI +QGLK + L+ E+ +RV N A V AVGT SL L +GLVLEL+NC
Sbjct: 263 FDTGLVAHICKSLQGLKRSRSLARGEVDIRVGNGARVAVVAVGTMSLSLPSGLVLELNNC 322
Query: 421 YYVPSISRNIISVSESSFKGKGDRA 445
Y +P++ +N+IS S +G G R+
Sbjct: 323 YCIPALCKNVISASCLQAEGYGFRS 347
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
Query: 198 FNLCSILDEDKLNMDNFLDWEKRLRIVLKSTNKESVLDTPIPK-ITANSKVEEQKQAKSI 256
FNL SIL+++KL NF+DW LRIVL+ +KE VL P P + N+ ++++ K
Sbjct: 9 FNLRSILEKEKLTGTNFMDWYGNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHKKQ 68
Query: 257 RMKSVSVTCLMLATMEPNLQKRFRKMDAHTIIRRLRDMSRNKSRLRKYGTSKAI 310
+ ++CLMLATM P LQ+++ +DAHTII LR+M +++R ++ TSK++
Sbjct: 69 CNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSL 122