BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3340.1
(437 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP34377.1 Retrovirus-related Pol polyprotein from transposon TN... 375 e-118
CAN60374.1 hypothetical protein VITISV_001215 [Vitis vinifera] 347 e-104
KYP64905.1 Retrovirus-related Pol polyprotein from transposon TN... 325 e-101
>KYP34377.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 938
Score = 375 bits (962), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/445 (48%), Positives = 269/445 (60%), Gaps = 44/445 (9%)
Query: 5 PNLSHLRVFGCLCYARIPLLKTKMDARSSAGIFLGYPNGQKGYRIYDISTRRIFVSRDVT 64
P+ S LRVFGCLC+A ++ K D RS GIF+GYP GQKGYRIYD+ +R+I+VS DV
Sbjct: 415 PSYSSLRVFGCLCFATNMNIQHKFDERSKPGIFVGYPFGQKGYRIYDLQSRKIYVSCDVQ 474
Query: 65 FVENKFPM----SPSYSSA----TPTRSD----PEPFLSIEDDDTFIFPTTGKYPTVSAP 112
F E FP SPS+ TP +D P + I D + +
Sbjct: 475 FHEAIFPFQDFSSPSFPDEICINTPINADDLLDPVTIVQIRPDISLANNQVANSDETTIS 534
Query: 113 NSSTITDGAVVPDSFQQITDSG-VPSDTLAGPGSGPGPLPTAPSLEVPLAAADDTPQSGA 171
S+ D + S + S +PS + P + P P + + +
Sbjct: 535 TSNPQDDNSTNSQSLSEDAPSNDIPSVETSLPPTNHSQRPRRPPHHLKDYVCNHIKSTTN 594
Query: 172 SPAA--------ADRHIP--DNSLSDSPPT------------EAISEQLVEISGCPTRSR 209
P A ++ H P N + + P EA+++++ + T S
Sbjct: 595 FPLANYLSLSNLSNFHQPFLTNIIGNQEPKSFSQAMKSAEWREAMAKEIQALESNNTWSL 654
Query: 210 RPPSHLDDYVCSNTSSRPIGCKWVYKIKFNSDGSIERYKARLVAKGYTQIEGLDYNDTFA 269
P IGCKWVYKIK+ SDGSIERYKA LVAKGYTQIEG+DY+DTFA
Sbjct: 655 CPLPQ---------GKSSIGCKWVYKIKYRSDGSIERYKACLVAKGYTQIEGIDYHDTFA 705
Query: 270 PVVKLVTVRVLLSIAAVKGWSLHQLDVNNAFLQGDLHEEVYMKLPPGFSSQGESKVCRLH 329
PV KLVTVR+LLSIAA+K WSLHQLDVNNAFLQGDL+EEVYMKLPPGFS +GE+ VC+LH
Sbjct: 706 PVAKLVTVRLLLSIAAIKNWSLHQLDVNNAFLQGDLNEEVYMKLPPGFSRKGETYVCKLH 765
Query: 330 KSLYGLKQATRQWFSKFSSVLIERVFSQSKSDYSLFTFRSHSTQIFVLVYVDDIIITGNN 389
KS+YGLKQA+RQWFSKFS+ LI+R F QS SDYSLFT+ S T +FVLVY+DDIIITGNN
Sbjct: 766 KSIYGLKQASRQWFSKFSTTLIQRGFRQSISDYSLFTYISGQTSVFVLVYIDDIIITGNN 825
Query: 390 DSAISKLKLFLNKSFSLKDLGRLQY 414
D AI +K FL +SFS+KDLG L+Y
Sbjct: 826 DDAIFNIKQFLAQSFSIKDLGNLRY 850
>CAN60374.1 hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 347 bits (890), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/486 (43%), Positives = 267/486 (54%), Gaps = 85/486 (17%)
Query: 5 PNLSHLRVFGCLCYARIPLLKTKMDARSSAGIFLGYPNGQKGYRIYDISTRRIFVSRDVT 64
P SHLRVFGCL YA + K D R+ A IF+GYP GQK Y+++++STR+IF SRDV
Sbjct: 762 PTYSHLRVFGCLAYATNVHVSHKFDHRAIACIFIGYPVGQKAYKLFNLSTRKIFTSRDVR 821
Query: 65 FVENKFPMSPSYSSATPTRS-------------DPEPFLSIEDDDTFIFPTTGKYPTVS- 110
F EN+FP + S+ S PT + DP P + PTT P+ S
Sbjct: 822 FHENRFPYA-SFESVLPTSNLGYSSGPIPVPIHDPTPSHVTNPSRLILPPTTDSAPSSSF 880
Query: 111 APNSSTITDGAVVPDSFQQITDSGVPSDTLAGPGSGPGP--------------------- 149
APN T+ +V P S I+D +PS P + P P
Sbjct: 881 APNLDTL--NSVAPISSSTISD--LPSPPAEQPTANPTPALLKTYTRRPKHAPSPMLEIP 936
Query: 150 LPTAPSLEVPLAAADDTPQSGASPAAADRHIPDNSLSDSPPTEAISEQLVEISGCPTRSR 209
P++PS+E L P S + ++ + PP A +E L RS
Sbjct: 937 TPSSPSVETLLPTTSSLPSSPSLLLSSSNPSDPSPSLLGPPQPAPTETLRR----SNRSH 992
Query: 210 RPPSHLDDYVCSN----------------------------------------TSSRPIG 229
PP+ L DYVCS+ T PIG
Sbjct: 993 NPPAKLQDYVCSHITHACSDQSPSLFPGLTKEAMRSELQALQANGTWTLTSLPTGKTPIG 1052
Query: 230 CKWVYKIKFNSDGSIERYKARLVAKGYTQIEGLDYNDTFAPVVKLVTVRVLLSIAAVKGW 289
C+WVYKIK SDGSIERYKARLVAKG+TQ+EG+DY DTF+P+ K++TV LL++AA + W
Sbjct: 1053 CRWVYKIKHRSDGSIERYKARLVAKGFTQLEGVDYQDTFSPIAKIITVCCLLALAAARRW 1112
Query: 290 SLHQLDVNNAFLQGDLHEEVYMKLPPGFSSQGESK-VCRLHKSLYGLKQATRQWFSKFSS 348
SLHQLDVNNAFL GDLHEE+YM PPG QGE VCRLHKSLYGLKQA+RQWFSKFS
Sbjct: 1113 SLHQLDVNNAFLHGDLHEEIYMSPPPGLRRQGEENLVCRLHKSLYGLKQASRQWFSKFSK 1172
Query: 349 VLIERVFSQSKSDYSLFTFRSHSTQIFVLVYVDDIIITGNNDSAISKLKLFLNKSFSLKD 408
+ + QS++DYSLFT + +L+YVDDI+ITGN+ +I+ +K FL+ F LKD
Sbjct: 1173 AIQAAGYVQSRADYSLFTRIQGKSFTALLIYVDDILITGNDSMSIAAIKKFLHSQFRLKD 1232
Query: 409 LGRLQY 414
LG L+Y
Sbjct: 1233 LGDLKY 1238
>KYP64905.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 651
Score = 325 bits (832), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/441 (42%), Positives = 253/441 (57%), Gaps = 48/441 (10%)
Query: 5 PNLSHLRVFGCLCYARIPLLKT-KMDARSSAGIFLGYPNGQKGYRIYDISTRRIFVSRDV 63
P+L+HLRVFG LCY K K +RS +FLGYP G+KG+R+YD+ SRDV
Sbjct: 233 PSLNHLRVFGSLCYVHNRDSKRDKFASRSRRCVFLGYPYGKKGWRVYDLELGVFLTSRDV 292
Query: 64 TFVENKFPMSPSYSSATPTRSDPE-----PFLSIEDDDTFIFPTTGKYPTVSAPNSSTIT 118
F E++FP + S +SA P D E P+ S++DDD ++ + +
Sbjct: 293 VFSESEFPCAESQNSA-PKHIDIEKDNLAPWNSVDDDDEM---------EIAQADFESRK 342
Query: 119 DGAVVPDSFQQITDSGVPSDTLAGPGSGPGPLPTAPSLEV---PLAAADDTPQSGASPAA 175
D P+ ++++ + T P L LA P+ AA
Sbjct: 343 D----PERYRRLVGRLIYLSV------------TRPELSYCVHTLAQFMQHPRQEHWDAA 386
Query: 176 ADRHIPDNSLSDSPPTEAISEQL--VEISGCPTRSRRPPSHLDDYVCSNTSSRPIGCKWV 233
++ D +A+ ++ +E +G T PP + IGCKWV
Sbjct: 387 LRVVRYLKAMKDKQWQQAMQAEIQALENNGTWTLEPLPPG-----------KKAIGCKWV 435
Query: 234 YKIKFNSDGSIERYKARLVAKGYTQIEGLDYNDTFAPVVKLVTVRVLLSIAAVKGWSLHQ 293
Y+IK+NSDGSIER+KARLV G Q+EGLDYN+TFAPV K+VTVR LL++AA + W LHQ
Sbjct: 436 YRIKYNSDGSIERFKARLVILGNNQVEGLDYNETFAPVAKMVTVRTLLAVAAARKWELHQ 495
Query: 294 LDVNNAFLQGDLHEEVYMKLPPGFSSQGESKVCRLHKSLYGLKQATRQWFSKFSSVLIER 353
+DV+NAFL GDL EEVYMKLPPGF SQ KVCRL KSLYGLKQA R WF+K + L
Sbjct: 496 MDVHNAFLHGDLEEEVYMKLPPGFRSQASGKVCRLRKSLYGLKQAPRCWFAKLAGALKRY 555
Query: 354 VFSQSKSDYSLFTFRSHSTQIFVLVYVDDIIITGNNDSAISKLKLFLNKSFSLKDLGRLQ 413
F+QS SD+SLFT + Q+ VLVYVDD++I+GN++ I KL+LN F +KDLG L+
Sbjct: 556 GFAQSSSDHSLFTLQRERVQLHVLVYVDDLVISGNDNVVIKAFKLYLNVCFHMKDLGMLK 615
Query: 414 YSVSKYLAHRKAFSYVNGNML 434
Y + +AH + + + G ++
Sbjct: 616 YFLGIEVAHPERYRRLVGRLI 636