BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3650.1
(513 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010275173.1 PREDICTED: pentatricopeptide repeat-containing pr... 708 0.0
XP_010662150.1 PREDICTED: pentatricopeptide repeat-containing pr... 654 0.0
XP_007029495.1 Pentatricopeptide repeat-containing protein, puta... 652 0.0
>XP_010275173.1 PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Nelumbo nucifera]
Length = 536
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/520 (66%), Positives = 423/520 (81%), Gaps = 16/520 (3%)
Query: 5 LPFSPPSLTSTHGVSS--SLPNIYFSFSKPKSTQTPFKHRRIK------------KAPKF 50
P L S HGVSS S S K+++T F + K + P
Sbjct: 7 FPLKASQLLSIHGVSSPFSCFGCRNSSVNCKTSKTSFGSTQGKGVEEETFLMASRRCPST 66
Query: 51 SNFNSILNHSAIT-KDFEEISRQNYNLLIRKHCNEGNVDKSMSLLAEMEALGFHPNSMSY 109
N N I N+S I+ + EEIS + YN+ IR +C EG++DKSM+LLA+MEALG PN +SY
Sbjct: 67 IN-NLIFNNSNISCSNKEEISCEIYNISIRNYCREGDIDKSMALLAQMEALGIRPNLISY 125
Query: 110 TNLIESLGTIGRTLEADSIFQEMKRSGFEPQVRAYNVLLRGFLRKGLLKLANTLFDEMLD 169
T +IE+LG++GRTLEAD+IFQEM+ SGFEP+V+AYNVLL+GFLRKGLL LA+ + EM D
Sbjct: 126 TCVIEALGSVGRTLEADAIFQEMRWSGFEPRVKAYNVLLKGFLRKGLLGLADRVLLEMGD 185
Query: 170 RGIIKNQETYEVLIEYYVSSGRLEDTWSVISEMKFKGFCLNSHVYSKIIGLYRDNGLWKK 229
I +NQ+TYE+L++YYV +GRL+DTWSVI+EMK +G LNS+VYSKII LYRDNG+W+K
Sbjct: 186 LDIGRNQDTYEILLDYYVHAGRLDDTWSVINEMKREGLKLNSYVYSKIINLYRDNGMWQK 245
Query: 230 ATELMREMTELKVPLDRRLYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIMTYNSLIR 289
A +++REM E+ VPLDRR+YNSIIDTFGKYGEL EAV FENMQ+EGI+PDIMT+NSLIR
Sbjct: 246 AMDVLREMREMGVPLDRRIYNSIIDTFGKYGELEEAVGAFENMQKEGIRPDIMTWNSLIR 305
Query: 290 WHCKRGDLGKTLEFFTQMQEEGLYPDPKTFGTIISRLGEEGKWDLIQKNFESMKLRGLWR 349
WHCK G++G LEF T+MQE+GLYPDPK F IISRL E+GKW+ I+KNFE+MK RGL +
Sbjct: 306 WHCKAGEVGGALEFLTKMQEQGLYPDPKIFVNIISRLAEQGKWNAIKKNFENMKHRGLRK 365
Query: 350 SGAIYAVLVDIYGQYGRYQNAEECLLALKSEGVQLSANMFCALANAYAQQGLCEQTVKVL 409
SG IYAVL DIYGQYGR+Q+A+ECLLALKSEG++ SANMFCALANAYAQQGLCEQTV++L
Sbjct: 366 SGVIYAVLADIYGQYGRFQDADECLLALKSEGLKPSANMFCALANAYAQQGLCEQTVRIL 425
Query: 410 QLMEAEGIEPNLIMLNLLINAFGIAGRHLEALSVFHHIKESGISPDVVTYSTLMKAFIRA 469
QLMEA+GIEPNLIMLN+LINAFG+AGRHLEALS+F+H+K+SGI+PDVVTYSTLMKAFIRA
Sbjct: 426 QLMEADGIEPNLIMLNMLINAFGVAGRHLEALSIFYHMKDSGINPDVVTYSTLMKAFIRA 485
Query: 470 KKFEHVSAIYKEMEAAGCTPDRKARELLQTATVVLQKRYG 509
+KF+ V IYKEME AGCTPDR+ARE+LQ A +VL++R+G
Sbjct: 486 RKFDQVPGIYKEMECAGCTPDRRAREMLQNALMVLEQRHG 525
>XP_010662150.1 PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 503
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/448 (68%), Positives = 378/448 (84%)
Query: 61 AITKDFEEISRQNYNLLIRKHCNEGNVDKSMSLLAEMEALGFHPNSMSYTNLIESLGTIG 120
+I+++ EE+S YN IR+ C G+VDK+M LLA+MEALGF + SYT +IE+LG++G
Sbjct: 56 SISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVG 115
Query: 121 RTLEADSIFQEMKRSGFEPQVRAYNVLLRGFLRKGLLKLANTLFDEMLDRGIIKNQETYE 180
RTLEA++IF+EM G + +R YNV+LR LRKGLL+LA+ + EM GI +N+ TYE
Sbjct: 116 RTLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYE 175
Query: 181 VLIEYYVSSGRLEDTWSVISEMKFKGFCLNSHVYSKIIGLYRDNGLWKKATELMREMTEL 240
L++YY +GRL D W+VI EM GF +S VYSK+IG+YRDNG+WKKA E++RE+ E+
Sbjct: 176 ALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREM 235
Query: 241 KVPLDRRLYNSIIDTFGKYGELNEAVEVFENMQREGIKPDIMTYNSLIRWHCKRGDLGKT 300
V LD+R+YNSIIDTFGK GEL+EA+EVFE MQ EG+KPDIMT+NSLI+WHCK GD+GK
Sbjct: 236 GVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKA 295
Query: 301 LEFFTQMQEEGLYPDPKTFGTIISRLGEEGKWDLIQKNFESMKLRGLWRSGAIYAVLVDI 360
LE F++MQEEGLYPDPK F TIISRLGE+GKWD+I++NFE+MK RG RSGAIYA+LVDI
Sbjct: 296 LELFSKMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDI 355
Query: 361 YGQYGRYQNAEECLLALKSEGVQLSANMFCALANAYAQQGLCEQTVKVLQLMEAEGIEPN 420
YGQYGR+Q EEC+ ALKSEG+Q SA+MFC LANAYAQQGLCEQTVKVLQLME EGIEPN
Sbjct: 356 YGQYGRFQGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPN 415
Query: 421 LIMLNLLINAFGIAGRHLEALSVFHHIKESGISPDVVTYSTLMKAFIRAKKFEHVSAIYK 480
LIMLN+LINAFGIAGRHLEALSV+HHIK++GISPDVVTYSTLMKA IRA+KF+ V IY+
Sbjct: 416 LIMLNMLINAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYE 475
Query: 481 EMEAAGCTPDRKARELLQTATVVLQKRY 508
EME+AGCTPDRKARE+LQTA +VLQ+R+
Sbjct: 476 EMESAGCTPDRKAREMLQTALLVLQQRH 503
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%)
Query: 60 SAITKDFEEISRQNYNLLIRKHCNEGNVDKSMSLLAEMEALGFHPNSMSYTNLIESLGTI 119
SA+ + + S + +L + +G ++++ +L ME G PN + LI + G
Sbjct: 370 SALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIA 429
Query: 120 GRTLEADSIFQEMKRSGFEPQVRAYNVLLRGFLRKGLLKLANTLFDEMLDRGIIKNQETY 179
GR LEA S++ +K +G P V Y+ L++ +R +++EM G +++
Sbjct: 430 GRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTPDRKAR 489
Query: 180 EVL 182
E+L
Sbjct: 490 EML 492
>XP_007029495.1 Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] EOY09997.1 Pentatricopeptide
repeat-containing protein, putative isoform 1 [Theobroma
cacao]
Length = 513
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/470 (65%), Positives = 392/470 (83%), Gaps = 2/470 (0%)
Query: 41 HRRIKKAP--KFSNFNSILNHSAITKDFEEISRQNYNLLIRKHCNEGNVDKSMSLLAEME 98
++R+K+ +F+ N I + + EE++ + +N I+ +C G+VD +M L+A ME
Sbjct: 44 YKRLKQGALTEFNKKNPIFKYPFGSNSGEELTSELHNQAIQGYCKIGDVDNAMKLVAHME 103
Query: 99 ALGFHPNSMSYTNLIESLGTIGRTLEADSIFQEMKRSGFEPQVRAYNVLLRGFLRKGLLK 158
A+GFHPNS+SY LIESLG++GRTLEAD++FQEM G +P++R +NVLL+GFLRKGLL+
Sbjct: 104 AMGFHPNSISYGFLIESLGSVGRTLEADALFQEMICLGLKPRIRLFNVLLKGFLRKGLLR 163
Query: 159 LANTLFDEMLDRGIIKNQETYEVLIEYYVSSGRLEDTWSVISEMKFKGFCLNSHVYSKII 218
LA + M +RG+ KNQETYE+L++YYV++GRLEDTW V++EMK KG LNS VYSKII
Sbjct: 164 LAVKVLVVMDERGVCKNQETYEILLDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKII 223
Query: 219 GLYRDNGLWKKATELMREMTELKVPLDRRLYNSIIDTFGKYGELNEAVEVFENMQREGIK 278
LYRDNG+W+KA ++ E+ E + LDR++YNSIIDTFGKYGEL+EA+EVFE M++E I+
Sbjct: 224 CLYRDNGMWRKAIGIVEEIREKGISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIR 283
Query: 279 PDIMTYNSLIRWHCKRGDLGKTLEFFTQMQEEGLYPDPKTFGTIISRLGEEGKWDLIQKN 338
PDI T+NSLI+WHCK GDL K LE FT+MQE+GLYPDPK F ++ISRLGE GKWD+I+KN
Sbjct: 284 PDITTWNSLIQWHCKAGDLTKALELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKN 343
Query: 339 FESMKLRGLWRSGAIYAVLVDIYGQYGRYQNAEECLLALKSEGVQLSANMFCALANAYAQ 398
FE+MK RG GAIYA+LVDIYGQYGR+Q+AE C+ ALKSEG+ SA+MFC LANAYAQ
Sbjct: 344 FENMKSRGHQDVGAIYAILVDIYGQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQ 403
Query: 399 QGLCEQTVKVLQLMEAEGIEPNLIMLNLLINAFGIAGRHLEALSVFHHIKESGISPDVVT 458
QG CEQTVKVLQ+MEAEGIEPN++MLN+LINAFGIAGRH EALS++HHI++SGISPDV+T
Sbjct: 404 QGFCEQTVKVLQIMEAEGIEPNIVMLNVLINAFGIAGRHEEALSIYHHIRDSGISPDVIT 463
Query: 459 YSTLMKAFIRAKKFEHVSAIYKEMEAAGCTPDRKARELLQTATVVLQKRY 508
YSTLMKAFIRAKKF+ V IY+EME++GCTPDRKAR++LQTA +VL++R+
Sbjct: 464 YSTLMKAFIRAKKFDRVPEIYREMESSGCTPDRKARQMLQTALMVLEQRH 513