BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000081.1_g3840.1
(132 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OAO89438.1 hypothetical protein AXX17_ATUG00590 [Arabidopsis tha... 85 1e-17
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 86 3e-17
BAA22288.1 polyprotein [Oryza australiensis] 84 3e-16
>OAO89438.1 hypothetical protein AXX17_ATUG00590 [Arabidopsis thaliana]
Length = 234
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 4/81 (4%)
Query: 1 MDKVPYASAIGSIMYVIIRTSQDVSYALSMCINYQSNPGEAHLTASKNILKFFRRTKDQP 60
M ++PYASAIGSIMY ++ T DV+ ALSM YQS+PGE+H TA KNILK+ R+TKD+
Sbjct: 32 MSRIPYASAIGSIMYAMLCTRPDVACALSMTSRYQSDPGESHWTADKNILKYLRKTKDKF 91
Query: 61 LPEDKNPEECECLAILYAMTW 81
L N E L + A++W
Sbjct: 92 LVYGGNDE----LVVSGAVSW 108
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 48/61 (78%)
Query: 1 MDKVPYASAIGSIMYVIIRTSQDVSYALSMCINYQSNPGEAHLTASKNILKFFRRTKDQP 60
M+ +PYASAIGSIMY +I T QDVSYALS+ YQ++PGE H TA KNILK+ RRTKD
Sbjct: 1085 MNGIPYASAIGSIMYAMICTRQDVSYALSVTSRYQADPGECHWTAVKNILKYLRRTKDAF 1144
Query: 61 L 61
L
Sbjct: 1145 L 1145
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 45/61 (73%)
Query: 1 MDKVPYASAIGSIMYVIIRTSQDVSYALSMCINYQSNPGEAHLTASKNILKFFRRTKDQP 60
M VPYASAIGSIMY ++ T DVSYALS YQS+PGE H TA KNILK+ RRTKD
Sbjct: 1089 MGMVPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMF 1148
Query: 61 L 61
L
Sbjct: 1149 L 1149