BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0150.1
(153 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013627779.1 PREDICTED: uncharacterized protein LOC106333945 [... 90 2e-19
XP_013682086.1 PREDICTED: uncharacterized protein LOC106386817 [... 89 5e-19
XP_006282203.1 hypothetical protein CARUB_v10028469mg [Capsella ... 82 3e-17
>XP_013627779.1 PREDICTED: uncharacterized protein LOC106333945 [Brassica oleracea
var. oleracea] CDY53479.1 BnaC03g14830D [Brassica napus]
Length = 204
Score = 89.7 bits (221), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 77/124 (62%), Gaps = 14/124 (11%)
Query: 1 MMNKVGQFFVLVLIVVSS-ATPGLADTQPEVQGETLLWPWTPHLPIDQDIQRCWSTIKSI 59
M K+ F +VL++ + PGLA+ Q T +P P PID I +CWS++ SI
Sbjct: 1 MEGKIEIIFSMVLVIATILMRPGLAEVQ-----TTPRFPSIPGSPID--ITKCWSSLTSI 53
Query: 60 EGCELEILNSLLGGRI-HLGPACCKAISDISENCFPKMFSGFLPPFSPLFPPLLKNYCAT 118
+GC +EI S++ G+ ++GPACCKA +D+ C+P MF P +PLFPPL+K+ C+
Sbjct: 54 QGCVMEIYKSVVTGKFENVGPACCKAFTDVDAKCWPTMF-----PLNPLFPPLIKDGCSR 108
Query: 119 VSGS 122
+SG+
Sbjct: 109 ISGA 112
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 8/88 (9%)
Query: 34 TLLWPWTPHLPIDQDIQRCWSTIKSIEGCELEILNSLLGGRI-HLGPACCKAISDISENC 92
TL +P P P+D + +C S++ S++GC EI SLL G+ ++G CCKA I C
Sbjct: 118 TLKFPVFPGSPVD--LTKCLSSLVSVQGCVTEIHKSLLTGKFDNVGAMCCKAFLAIDAKC 175
Query: 93 FPKMFSGFLPPFSPLFPPLLKNYCATVS 120
+P+MF P +P FPPLLK+ C+ ++
Sbjct: 176 WPQMF-----PLNPFFPPLLKDGCSRIA 198
>XP_013682086.1 PREDICTED: uncharacterized protein LOC106386817 [Brassica napus]
Length = 204
Score = 88.6 bits (218), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 76/124 (61%), Gaps = 14/124 (11%)
Query: 1 MMNKVGQFFVLVLIVVSS-ATPGLADTQPEVQGETLLWPWTPHLPIDQDIQRCWSTIKSI 59
M K+ F +VL++ + PGLA+ Q T +P P PID I +CWS++ SI
Sbjct: 1 MEGKIEIIFSMVLVIATILMRPGLAEVQ-----TTPRFPSIPGSPID--ITKCWSSLTSI 53
Query: 60 EGCELEILNSLLGGRI-HLGPACCKAISDISENCFPKMFSGFLPPFSPLFPPLLKNYCAT 118
+GC EI S++ G+ ++GPACCKA +D+ C+P MF P +PLFPPL+K+ C+
Sbjct: 54 QGCVTEIYKSVVTGKFENVGPACCKAFTDVDAKCWPTMF-----PLNPLFPPLIKDGCSR 108
Query: 119 VSGS 122
+SG+
Sbjct: 109 ISGA 112
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 8/88 (9%)
Query: 34 TLLWPWTPHLPIDQDIQRCWSTIKSIEGCELEILNSLLGGRI-HLGPACCKAISDISENC 92
TL +P P P+D + +C S++ S++GC EI SLL G+ ++G CCKA I C
Sbjct: 118 TLKFPVFPGSPVD--LTKCLSSLVSVQGCVTEIHKSLLTGKFDNVGAMCCKAFLAIDAKC 175
Query: 93 FPKMFSGFLPPFSPLFPPLLKNYCATVS 120
+P+MF P +P FPPLLK+ C+ ++
Sbjct: 176 WPQMF-----PLNPFFPPLLKDGCSRIA 198
>XP_006282203.1 hypothetical protein CARUB_v10028469mg [Capsella rubella]
EOA15101.1 hypothetical protein CARUB_v10028469mg
[Capsella rubella]
Length = 120
Score = 81.6 bits (200), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 68/118 (57%), Gaps = 15/118 (12%)
Query: 5 VGQFFVLVLIVVSSATPGLADTQ--PEVQGETLLWPWTPHLPIDQDIQRCWSTIKSIEGC 62
V F +L L + AT G+A TQ P V G L P PID + +CWS++ S+EGC
Sbjct: 7 VSIFLILSLCAATFATQGVAHTQTPPTVPGFFL-----PGSPID--LVKCWSSLFSVEGC 59
Query: 63 ELEILNSLLGGRI-HLGPACCKAISDISENCFPKMFSGFLPPFSPLFPPLLKNYCATV 119
LEI S+ G+ ++ ACCKA S + NC+P MF P +P FPPLLK+ CA +
Sbjct: 60 VLEISKSIFSGKFENVQAACCKAFSTLDANCWPHMF-----PLNPFFPPLLKDTCAHI 112