BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0160.1
(160 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013627779.1 PREDICTED: uncharacterized protein LOC106333945 [... 82 1e-16
XP_013682086.1 PREDICTED: uncharacterized protein LOC106386817 [... 81 3e-16
XP_006281765.1 hypothetical protein CARUB_v10027929mg [Capsella ... 77 8e-15
>XP_013627779.1 PREDICTED: uncharacterized protein LOC106333945 [Brassica oleracea
var. oleracea] CDY53479.1 BnaC03g14830D [Brassica napus]
Length = 204
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 15/124 (12%)
Query: 1 MMSKVGQIFVLLLIVVSS-ATPGLADTQPAEVRGETLLWPWIPHTTIDPAIERCWSTIKS 59
M K+ IF ++L++ + PGLA+ Q T +P IP + ID I +CWS++ S
Sbjct: 1 MEGKIEIIFSMVLVIATILMRPGLAEVQ------TTPRFPSIPGSPID--ITKCWSSLTS 52
Query: 60 IEGCELEILNSLLGGLIK-LGPACCKAISDISENCIPKMFSGFLPPFSPLFPPFLKNYCA 118
I+GC +EI S++ G + +GPACCKA +D+ C P MF P +PLFPP +K+ C+
Sbjct: 53 IQGCVMEIYKSVVTGKFENVGPACCKAFTDVDAKCWPTMF-----PLNPLFPPLIKDGCS 107
Query: 119 TISA 122
IS
Sbjct: 108 RISG 111
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 35 TLLWPWIPHTTIDPAIERCWSTIKSIEGCELEILNSLL-GGLIKLGPACCKAISDISENC 93
TL +P P + +D + +C S++ S++GC EI SLL G +G CCKA I C
Sbjct: 118 TLKFPVFPGSPVD--LTKCLSSLVSVQGCVTEIHKSLLTGKFDNVGAMCCKAFLAIDAKC 175
Query: 94 IPKMFSGFLPPFSPLFPPFLKNYCATISA 122
P+MF P +P FPP LK+ C+ I+
Sbjct: 176 WPQMF-----PLNPFFPPLLKDGCSRIAV 199
>XP_013682086.1 PREDICTED: uncharacterized protein LOC106386817 [Brassica napus]
Length = 204
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 15/124 (12%)
Query: 1 MMSKVGQIFVLLLIVVSS-ATPGLADTQPAEVRGETLLWPWIPHTTIDPAIERCWSTIKS 59
M K+ IF ++L++ + PGLA+ Q T +P IP + ID I +CWS++ S
Sbjct: 1 MEGKIEIIFSMVLVIATILMRPGLAEVQ------TTPRFPSIPGSPID--ITKCWSSLTS 52
Query: 60 IEGCELEILNSLLGGLIK-LGPACCKAISDISENCIPKMFSGFLPPFSPLFPPFLKNYCA 118
I+GC EI S++ G + +GPACCKA +D+ C P MF P +PLFPP +K+ C+
Sbjct: 53 IQGCVTEIYKSVVTGKFENVGPACCKAFTDVDAKCWPTMF-----PLNPLFPPLIKDGCS 107
Query: 119 TISA 122
IS
Sbjct: 108 RISG 111
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 35 TLLWPWIPHTTIDPAIERCWSTIKSIEGCELEILNSLL-GGLIKLGPACCKAISDISENC 93
TL +P P + +D + +C S++ S++GC EI SLL G +G CCKA I C
Sbjct: 118 TLKFPVFPGSPVD--LTKCLSSLVSVQGCVTEIHKSLLTGKFDNVGAMCCKAFLAIDAKC 175
Query: 94 IPKMFSGFLPPFSPLFPPFLKNYCATISA 122
P+MF P +P FPP LK+ C+ I+
Sbjct: 176 WPQMF-----PLNPFFPPLLKDGCSRIAV 199
>XP_006281765.1 hypothetical protein CARUB_v10027929mg [Capsella rubella]
EOA14663.1 hypothetical protein CARUB_v10027929mg
[Capsella rubella]
Length = 199
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
Query: 39 PWIPHTTIDPAIERCWSTIKSIEGCELEILNSLLGGLIK-LGPACCKAISDISENCIPKM 97
P IP + ID + +CWS++ I+GCE+EIL S L G + +GP CCKA +I C PKM
Sbjct: 31 PTIPGSPID--LAKCWSSLLKIQGCEIEILKSALTGKFQNVGPTCCKAFVEIDAKCWPKM 88
Query: 98 FSGFLPPFSPLFPPFLKNYCATISARGGVSSPPPPP 133
F P +P FPP LKN C+ I+A + P P
Sbjct: 89 F-----PLNPFFPPLLKNMCSRINAAAPAHTKPQFP 119
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 39 PWIPHTTIDPAIERCWSTIKSIEGCELEILNSLLGGLI-KLGPACCKAISDISENCIPKM 97
P P + ID + +C S++ ++EGC EI S+ +GP CCKA S + C P++
Sbjct: 116 PQFPGSPID--LTKCLSSLVNVEGCLSEIYKSVFTRKFGNVGPMCCKAFSAVDAKCWPRI 173
Query: 98 FSGFLPPFSPLFPPFLKNYCATISA 122
F P +P FPP LK+ C+ I+A
Sbjct: 174 F-----PLNPFFPPLLKSKCSRINA 193