BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0240.1
(250 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN60158.1 hypothetical protein VITISV_007128 [Vitis vinifera] 268 8e-88
CAN75871.1 hypothetical protein VITISV_042255 [Vitis vinifera] 261 5e-84
KYP64870.1 Retrovirus-related Pol polyprotein from transposon TN... 261 8e-83
>CAN60158.1 hypothetical protein VITISV_007128 [Vitis vinifera]
Length = 232
Score = 268 bits (686), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 156/203 (76%), Gaps = 1/203 (0%)
Query: 47 LGKEGRYPSNLGLDHWKVVKWVMRYLQRTKDYKLTFRRNNHLKIVGYSDSDFAGCIDSK- 105
+G GRY SN G+DHW+ K VMRYLQRTK+Y LT+RR + L+++GYSDSDFAGC DS+
Sbjct: 28 VGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLDQLELIGYSDSDFAGCQDSRR 87
Query: 106 SISGYIYMMVRGVISWKNVKQTLVASSTMEVEFIACFEASNHAIWLQNFVSKLEIVDNIE 165
S S YIY++ G ISW++ KQTLV SSTME EF+AC+EASN IWL+NFV+ L ++D IE
Sbjct: 88 STSCYIYLLAGGAISWRSAKQTLVTSSTMEAEFVACYEASNQGIWLRNFVTGLRVLDGIE 147
Query: 166 RPMKIYCDNKAAELYSNNNRSSSKSKYIGIKYFTVKDIVQNDLVCIEHIVINSNIVDPFT 225
RP+KI+CDNK+A LYSNNNRSS+KSKYI IK+ VK+ VQ+ + IEHI NS I DP T
Sbjct: 148 RPLKIFCDNKSAVLYSNNNRSSTKSKYIDIKFLVVKEKVQSGQISIEHIGTNSMIADPLT 207
Query: 226 KGLPPKMFCAQVVCMGVLGPPDI 248
KGLPPK+F MGV+ DI
Sbjct: 208 KGLPPKVFHEHTAHMGVVSFEDI 230
>CAN75871.1 hypothetical protein VITISV_042255 [Vitis vinifera]
Length = 284
Score = 261 bits (666), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 134/199 (67%), Positives = 162/199 (81%), Gaps = 1/199 (0%)
Query: 53 YPSNLGLDHWKVVKWVMRYLQRTKDYKLTFRRNNHLKIVGYSDSDFAGCIDSK-SISGYI 111
Y SN G+DHWK K VMRYLQRTKDY LT+RR++HL+IVGYSDSDFAGC+DS+ S SGYI
Sbjct: 86 YLSNPGMDHWKKAKRVMRYLQRTKDYMLTYRRSSHLEIVGYSDSDFAGCLDSRRSTSGYI 145
Query: 112 YMMVRGVISWKNVKQTLVASSTMEVEFIACFEASNHAIWLQNFVSKLEIVDNIERPMKIY 171
+M+ G +SWK+VKQTLVASSTME EFIAC+EASNH IWL+NFV++L IVD IE+P++I
Sbjct: 146 FMLAGGAVSWKSVKQTLVASSTMEAEFIACYEASNHGIWLRNFVTQLRIVDGIEKPLRIN 205
Query: 172 CDNKAAELYSNNNRSSSKSKYIGIKYFTVKDIVQNDLVCIEHIVINSNIVDPFTKGLPPK 231
CDNKAAELYS NNRSSSKSK+I IK+ VK+ VQ+ V IEHI NS I DP TKGLPPK
Sbjct: 206 CDNKAAELYSKNNRSSSKSKHIDIKFLVVKERVQSLQVSIEHISTNSMIADPLTKGLPPK 265
Query: 232 MFCAQVVCMGVLGPPDIID 250
++ V MGV+ D+++
Sbjct: 266 VYHEHVTHMGVVHIDDVLE 284
>KYP64870.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan] KYP73943.1 Retrovirus-related Pol
polyprotein from transposon TNT 1-94 [Cajanus cajan]
Length = 384
Score = 261 bits (667), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 154/198 (77%), Gaps = 1/198 (0%)
Query: 47 LGKEGRYPSNLGLDHWKVVKWVMRYLQRTKDYKLTFRRNNHLKIVGYSDSDFAGCIDSK- 105
+G GRY SN G+ HWK VK VMRYL+RTK Y LT+++++ L+I+GYSDSDFAGC DSK
Sbjct: 181 VGVLGRYLSNPGMQHWKAVKRVMRYLKRTKGYMLTYQKSDSLEIIGYSDSDFAGCQDSKR 240
Query: 106 SISGYIYMMVRGVISWKNVKQTLVASSTMEVEFIACFEASNHAIWLQNFVSKLEIVDNIE 165
S SGYI+M+ G ISWK+VKQT++ASSTM EFIACFEASNH IWL+NF++ L +V+ IE
Sbjct: 241 STSGYIFMLAGGAISWKSVKQTIIASSTMAAEFIACFEASNHGIWLRNFITNLRVVNGIE 300
Query: 166 RPMKIYCDNKAAELYSNNNRSSSKSKYIGIKYFTVKDIVQNDLVCIEHIVINSNIVDPFT 225
RP+KIYCDN +A LYSNNNRS++KSK+I IK+ VK+ VQN + IEHI N + DP T
Sbjct: 301 RPLKIYCDNNSAVLYSNNNRSTTKSKFIDIKFLVVKERVQNKQISIEHIGTNFMLADPLT 360
Query: 226 KGLPPKMFCAQVVCMGVL 243
KGL PK+F MGV+
Sbjct: 361 KGLVPKVFHEHTAHMGVI 378