BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0260.1
(173 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007046707.1 Transducin/WD40 repeat-like superfamily protein [... 78 1e-13
XP_016678589.1 PREDICTED: uncharacterized protein LOC107897602 [... 73 1e-13
CDP01906.1 unnamed protein product [Coffea canephora] 72 1e-13
>XP_007046707.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
EOX90864.1 Transducin/WD40 repeat-like superfamily
protein [Theobroma cacao]
Length = 787
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 54 RSANNNNRLSPMSLLERFREVVLRLIMINAAISKTTRDRDELINVSCRRTHNYFQDQDHH 113
+ +N N RLSPM+LLERFRE VLRLIM+ +A++KT+ S Y+ HH
Sbjct: 277 KGSNKNKRLSPMTLLERFREAVLRLIML-SALTKTSHHH----TGSSTAPRKYYPADAHH 331
Query: 114 SDAVSECIDFIKKSASTVE 132
S+AV++CI+FIKK AS VE
Sbjct: 332 SEAVADCIEFIKKKASRVE 350
>XP_016678589.1 PREDICTED: uncharacterized protein LOC107897602 [Gossypium
hirsutum]
Length = 122
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 57 NNNNRLSPMSLLERFREVVLRLIMINAAISKTTRDRDELINVSCRRTHNYFQDQD-HHSD 115
N N RLSPM+LLERFRE V RLIM+ +A++K + Y+Q D HHS+
Sbjct: 26 NKNKRLSPMNLLERFREAVFRLIML-SALTKAAATHPHTTPAASGAPRRYYQPADTHHSE 84
Query: 116 AVSECIDFIKKSASTVE 132
AV++CI+FIKK +S E
Sbjct: 85 AVADCIEFIKKKSSREE 101
>CDP01906.1 unnamed protein product [Coffea canephora]
Length = 105
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 53 NRSANNNNRLSPMSLLERFREVVLRLIMINAAISKTTRDRDELINVSCR-RTHNYFQDQD 111
+R NNRLSPMSLL+RFRE VL+LI+++A R N + R + NY +
Sbjct: 13 SRWTRKNNRLSPMSLLDRFREAVLKLILLSALTKTANNGRKYSANAAQRSSSSNYNPYEP 72
Query: 112 HHSDAVSECIDFIKKSAST 130
H S+AV++CI+FIKKS +T
Sbjct: 73 HQSEAVADCIEFIKKSVTT 91