BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000093.1_g0260.1
         (173 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_007046707.1 Transducin/WD40 repeat-like superfamily protein [...    78   1e-13
XP_016678589.1 PREDICTED: uncharacterized protein LOC107897602 [...    73   1e-13
CDP01906.1 unnamed protein product [Coffea canephora]                  72   1e-13

>XP_007046707.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
           EOX90864.1 Transducin/WD40 repeat-like superfamily
           protein [Theobroma cacao]
          Length = 787

 Score = 77.8 bits (190), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 5/79 (6%)

Query: 54  RSANNNNRLSPMSLLERFREVVLRLIMINAAISKTTRDRDELINVSCRRTHNYFQDQDHH 113
           + +N N RLSPM+LLERFRE VLRLIM+ +A++KT+         S      Y+    HH
Sbjct: 277 KGSNKNKRLSPMTLLERFREAVLRLIML-SALTKTSHHH----TGSSTAPRKYYPADAHH 331

Query: 114 SDAVSECIDFIKKSASTVE 132
           S+AV++CI+FIKK AS VE
Sbjct: 332 SEAVADCIEFIKKKASRVE 350


>XP_016678589.1 PREDICTED: uncharacterized protein LOC107897602 [Gossypium
           hirsutum]
          Length = 122

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 2/77 (2%)

Query: 57  NNNNRLSPMSLLERFREVVLRLIMINAAISKTTRDRDELINVSCRRTHNYFQDQD-HHSD 115
           N N RLSPM+LLERFRE V RLIM+ +A++K           +      Y+Q  D HHS+
Sbjct: 26  NKNKRLSPMNLLERFREAVFRLIML-SALTKAAATHPHTTPAASGAPRRYYQPADTHHSE 84

Query: 116 AVSECIDFIKKSASTVE 132
           AV++CI+FIKK +S  E
Sbjct: 85  AVADCIEFIKKKSSREE 101


>CDP01906.1 unnamed protein product [Coffea canephora]
          Length = 105

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)

Query: 53  NRSANNNNRLSPMSLLERFREVVLRLIMINAAISKTTRDRDELINVSCR-RTHNYFQDQD 111
           +R    NNRLSPMSLL+RFRE VL+LI+++A        R    N + R  + NY   + 
Sbjct: 13  SRWTRKNNRLSPMSLLDRFREAVLKLILLSALTKTANNGRKYSANAAQRSSSSNYNPYEP 72

Query: 112 HHSDAVSECIDFIKKSAST 130
           H S+AV++CI+FIKKS +T
Sbjct: 73  HQSEAVADCIEFIKKSVTT 91


Top